Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_007779 | 1,472,039 | 0 | G→A | 100.0% | ‑0.5 | 1 | R323Q (CGG→CAG) | insI | IS30 transposase |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (0/0): ref base (1/0): total (1/0) |
CTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAA‑CACAAATGGGCTAATTCGG‑CAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGA > NC_007779/1472021‑1472120 | cTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACCCCAAAGGGGCT‑ATTCGGCCGGTACTTCCTAAAAAAGACATGCTTTCCCCATTTTCCCCAACTTGa > 1:7368992/1‑101 (MQ=0) | CTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAA‑CACAAATGGGCTAATTCGG‑CAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGA > NC_007779/1472021‑1472120 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |