New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2411459 =NA (NA)29 (0.110) 26/178 NT 11.0% intergenic (‑148/+14) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
?NC_007779 = 2941347 238 (0.920)intergenic (‑124/+227) gcvA/ygdI DNA‑binding transcriptional dual regulator/hypothetical protein

Only 100 of 359 total aligned reads displayed.

TGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGG  >  NC_007779/2941247‑2941447
                                                                                                    |                                                                                                    
tGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGG                                                                                                      >  1:9011962‑M2/1‑101 (MQ=255)
  aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcg                                                                                                    <  1:2732310/101‑1 (MQ=255)
  aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcg                                                                                                    >  1:8269096/1‑101 (MQ=255)
  aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcg                                                                                                    <  1:10875694/101‑1 (MQ=255)
  aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgt                                                                                                    <  1:12994757‑M2/101‑3 (MQ=255)
    tttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcggc                                                                                                  <  1:10612877/101‑1 (MQ=255)
    tttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcggc                                                                                                  <  1:10682194/101‑1 (MQ=255)
    tttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcggc                                                                                                  <  1:11688920/101‑1 (MQ=255)
     ttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCa                                                                                                 >  1:7798373/1‑101 (MQ=255)
     ttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCa                                                                                                 >  1:8387915/1‑101 (MQ=255)
      tAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCAc                                                                                                >  1:2544410/1‑101 (MQ=255)
       aaCAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACt                                                                                               <  1:565349/101‑1 (MQ=255)
       aaCAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACt                                                                                               >  1:4758865/1‑101 (MQ=255)
        agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtaggcagcatcaccCCTATAGTGGCGGCACtt                                                                                              <  1:12890905‑M2/18‑1 (MQ=255)
        aCAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgac                                                                                              <  1:12717984‑M2/101‑9 (MQ=255)
         cAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTc                                                                                             >  1:9648410/1‑101 (MQ=255)
          aaTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTcc                                                                                            >  1:2498514/1‑101 (MQ=255)
          aaTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTcc                                                                                            >  1:1073533/1‑101 (MQ=255)
             cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGa                                                                                         >  1:3662912‑M2/79‑101 (MQ=255)
                 tCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCg                                                                                     >  1:10441077/1‑101 (MQ=255)
                 tCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCg                                                                                     <  1:4068692/101‑1 (MQ=255)
                   acacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGa                                                                                   >  1:5972994/1‑101 (MQ=255)
                   acacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGa                                                                                   <  1:8782505/101‑1 (MQ=255)
                    tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGaa                                                                                  >  1:5382795‑M2/72‑101 (MQ=255)
                    cacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGaa                                                                                  >  1:6442792/1‑101 (MQ=255)
                    cacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGaa                                                                                  <  1:1586279/101‑1 (MQ=255)
                      cTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACg                                                                                >  1:7197104/1‑101 (MQ=255)
                          cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGaaaa                                                                            <  1:1896061‑M2/36‑1 (MQ=255)
                           tAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAg                                                                           >  1:13330952/1‑101 (MQ=255)
                           tAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAg                                                                           <  1:9817138/101‑1 (MQ=255)
                            aaCCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGt                                                                          >  1:11123624/1‑101 (MQ=255)
                                tATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTa                                                                      >  1:3794441/1‑101 (MQ=255)
                                 aTTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTAt                                                                     <  1:2133459/101‑1 (MQ=255)
                                 aTTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAACTTTTAt                                                                     <  1:9571233/101‑1 (MQ=255)
                                  ttAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCTCTTCCTGAGCCGGAACGAAAAGTTTTATc                                                                    <  1:993906/101‑1 (MQ=255)
                                  ttAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATc                                                                    >  1:1427150/1‑101 (MQ=255)
                                   tAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCg                                                                   <  1:10337618/101‑1 (MQ=255)
                                    aGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCgg                                                                  >  1:6479044/1‑101 (MQ=255)
                                     gTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGa                                                                 >  1:1806081/1‑101 (MQ=255)
                                     gTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGa                                                                 <  1:7881545/101‑1 (MQ=255)
                                     gTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGa                                                                 >  1:11235763/1‑101 (MQ=255)
                                      tttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGaa                                                                <  1:1675432/101‑1 (MQ=255)
                                       ttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAAt                                                               >  1:6763352/1‑101 (MQ=255)
                                       ttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAAt                                                               <  1:6675747/101‑1 (MQ=255)
                                         ttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGc                                                             <  1:506838/101‑1 (MQ=255)
                                         ttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGc                                                             >  1:12370027/1‑101 (MQ=255)
                                            tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtg                                                          <  1:9209439/101‑1 (MQ=255)
                                            tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtg                                                          <  1:4277029/101‑1 (MQ=255)
                                                    gCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgttagtgttttatgttcagataatgcccgatga                                                  >  1:8124205‑M2/1‑49 (MQ=255)
                                                    gCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTg                                                  <  1:4401718/101‑1 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                >  1:6546120/1‑101 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                <  1:10143516/101‑1 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                >  1:3412960/1‑101 (MQ=255)
                                                         tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtt                                             <  1:375381/101‑1 (MQ=255)
                                                          catacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACttt                                            <  1:5699659‑M2/68‑1 (MQ=255)
                                                           taAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtttt                                           <  1:8898321/101‑1 (MQ=255)
                                                           atacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtttt                                           >  1:6049375‑M2/33‑101 (MQ=255)
                                                               ttGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                       >  1:8505726‑M2/1‑38 (MQ=255)
                                                                tGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCtt                                      >  1:11926423/1‑101 (MQ=255)
                                                                tGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCtt                                      <  1:6628504/101‑1 (MQ=255)
                                                                 taaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTa                                     >  1:12280015‑M2/27‑101 (MQ=255)
                                                                 gTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTa                                     >  1:867901/1‑101 (MQ=255)
                                                                  aaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTAc                                    <  1:7346449‑M2/76‑1 (MQ=255)
                                                                   ccGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACg                                   >  1:2415687/1‑101 (MQ=255)
                                                                   aatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACg                                   >  1:5120651‑M2/25‑101 (MQ=255)
                                                                     tcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                                 >  1:12603836‑M2/23‑101 (MQ=255)
                                                                     tcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                                 >  1:6189142‑M2/23‑101 (MQ=255)
                                                                        gAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTtgt                              <  1:3913655/101‑1 (MQ=255)
                                                                        gAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTtgt                              >  1:4854240/1‑101 (MQ=255)
                                                                          gCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGa                            >  1:12093644/1‑101 (MQ=255)
                                                                           cTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                           <  1:7582425‑M2/101‑76 (MQ=255)
                                                                           cTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAt                           >  1:4561262/1‑101 (MQ=255)
                                                                              cTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgtt                        >  1:13175195/1‑101 (MQ=255)
                                                                                aCCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgt                      <  1:2833285/101‑1 (MQ=255)
                                                                                aCCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgt                      >  1:9345037/1‑101 (MQ=255)
                                                                                aCCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgt                      >  1:1376866/1‑101 (MQ=255)
                                                                                  cAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgt                    >  1:3340434/1‑101 (MQ=255)
                                                                                     cAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgt                 >  1:7462450/1‑101 (MQ=255)
                                                                                     cAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgt                 <  1:6261359/101‑1 (MQ=255)
                                                                                       aaTACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttg               <  1:6886804/101‑1 (MQ=255)
                                                                                         tACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag             >  1:5556356‑M2/1‑12 (MQ=255)
                                                                                         tACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttgtg             >  1:7682905/1‑101 (MQ=255)
                                                                                           ccTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATgttgtgttgttgtgtt           <  1:5181568/101‑1 (MQ=255)
                                                                                            cTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGttt          >  1:2208975/1‑101 (MQ=255)
                                                                                             tataGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTg         <  1:7022667/101‑1 (MQ=255)
                                                                                               taGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCa       >  1:11813055/1‑101 (MQ=255)
                                                                                               taGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCa       >  1:3135751/1‑101 (MQ=255)
                                                                                                aGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGGGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCaa      >  1:9478315/1‑101 (MQ=255)
                                                                                                 gTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAAt     <  1:705108/101‑1 (MQ=255)
                                                                                                  tGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAAtt    <  1:5794289/101‑1 (MQ=255)
                                                                                                   ggcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTg   >  1:9140814/1‑101 (MQ=255)
                                                                                                   ggcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTg   >  1:6969690/1‑101 (MQ=255)
                                                                                                   ggcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGGGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTg   <  1:10600949/101‑1 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  <  1:5737653‑M2/101‑101 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  >  1:5836349‑M2/1‑1 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  <  1:11476637‑M2/101‑101 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  >  1:9432591‑M2/1‑1 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  <  1:10954378‑M2/101‑101 (MQ=255)
                                                                                                    gcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTgg  <  1:9728686/101‑1 (MQ=255)
                                                                                                    gcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTgg  <  1:10214230/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGG  >  NC_007779/2941247‑2941447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.