BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 2412225	NA (NA)	3 (0.010)	3/180	NT	1.3%	intergenic (‑55/‑782)	insA/yfbQ	IS1 element protein/aminotransferase
*	?	NC_007779	2643570 =	225 (0.870)	3 (0.010)	3/180	NT	1.3%	intergenic (‑50/+99)	ndk/pbpC	multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'‑phosphodiesterase/fused transglycosylase and transpeptidase

Only 100 of 251 total aligned reads displayed.

TTTTGCTACCGCGTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAGACT  >  NC_007779/2643470‑2643670

ttttGCTACCGCGTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATg                                                                                                      >  1:923932/1‑101 (MQ=255)

      tACCGCGTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCgg                                                                                                <  1:299936/101‑1 (MQ=255)

       aCCGCGTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGa                                                                                               <  1:5031238/101‑1 (MQ=255)

        ccGCGTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGAt                                                                                              >  1:9682516/1‑101 (MQ=255)

           cgTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATtat                                                                                           >  1:4082956/1‑101 (MQ=255)

               cGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATg                                                                                       <  1:7305734/101‑1 (MQ=255)

               cGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATg                                                                                       >  1:205020/1‑101 (MQ=255)

               cGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTAAGAGATGGCGCGGATTATAATg                                                                                       >  1:2287649/1‑101 (MQ=255)

                ggTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGa                                                                                      >  1:2472176/1‑101 (MQ=255)

                 gTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAg                                                                                     >  1:1833802/1‑101 (MQ=255)

                 gTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAg                                                                                     >  1:1353844/1‑101 (MQ=255)

                    tgatgaTGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCaa                                                                                  <  1:7985505/101‑1 (MQ=255)

                       tgatgGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAg                                                                               <  1:3198271/101‑1 (MQ=255)

                       tgatgGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAg                                                                               <  1:12067396/101‑1 (MQ=255)

                        gatgGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAgg                                                                              <  1:9904168/101‑1 (MQ=255)

                         ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGCGGATTATAATGAGCAACAggg                                                                             >  1:1129336‑M2/76‑101 (MQ=255)

                          tgGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGc                                                                            >  1:6126648/1‑101 (MQ=255)

                             aaaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGt                                                                         <  1:12156113/101‑1 (MQ=255)

                             aaaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGt                                                                         >  1:4781387/1‑101 (MQ=255)

                             aaaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGt                                                                         >  1:12905204/1‑101 (MQ=255)

                              aaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGtt                                                                        <  1:2686234/101‑1 (MQ=255)

                              aaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGtt                                                                        <  1:2239843/101‑1 (MQ=255)

                              aaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGtt                                                                        <  1:12014901/101‑1 (MQ=255)

                              aaaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGtt                                                                        >  1:7899559/1‑101 (MQ=255)

                               aaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTg                                                                       <  1:6682620/101‑1 (MQ=255)

                               aaaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTg                                                                       <  1:2768300/101‑1 (MQ=255)

                                aaGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGa                                                                      <  1:8930001/101‑1 (MQ=255)

                                 aGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGAc                                                                     >  1:1504986/1‑101 (MQ=255)

                                   tACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTa                                                                   <  1:5535143/101‑1 (MQ=255)

                                      gTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATtg                                                                >  1:7400828/1‑101 (MQ=255)

                                      gTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATtg                                                                <  1:6198873/101‑1 (MQ=255)

                                       ttCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATtga                                                               >  1:7660940/1‑101 (MQ=255)

                                       agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATtga                                                               <  1:9769509‑M2/40‑1 (MQ=255)

                                           aTAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGaa                                                           >  1:73463/1‑101 (MQ=255)

                                           aTAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGaa                                                           <  1:8693704/101‑1 (MQ=255)

                                           aTAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGaa                                                           <  1:7138535/101‑1 (MQ=255)

                                           aTAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGaa                                                           <  1:5121040/101‑1 (MQ=255)

                                           aTAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGaa                                                           <  1:3029993/101‑1 (MQ=255)

                                            tAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAg                                                          <  1:3947531/101‑1 (MQ=255)

                                              gCCATTTTTACCTCTGTGAATTGTTCTGTTGTTGTGGGTACAAGGGTACGAGATGGCGCGGAGTATAAAGAGAAACAGCGCCGTTGACTATTGATGAAgga                                                        >  1:5400141/1‑100 (MQ=255)

                                               ccATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTa                                                       <  1:8182885/101‑1 (MQ=255)

                                               ccATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTa                                                       >  1:12327097/1‑101 (MQ=255)

                                                cATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTaa                                                      <  1:5656146/101‑1 (MQ=255)

                                                cATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTaa                                                      <  1:5980300/101‑1 (MQ=255)

                                                 aTTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAAc                                                     >  1:12453365/1‑101 (MQ=255)

                                                  tttttACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACa                                                    >  1:10979517/1‑101 (MQ=255)

                                                  tttttACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACa                                                    >  1:12559038/1‑101 (MQ=255)

                                                   ttttACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACAt                                                   <  1:12196187/101‑1 (MQ=255)

                                                   ttttACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACAt                                                   >  1:12426166/1‑101 (MQ=255)

                                                    tttACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAATGTAACAtt                                                  <  1:4204493/101‑1 (MQ=255)

                                                    tttACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACAtt                                                  <  1:3351193/101‑1 (MQ=255)

                                                      tACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACAtttt                                                >  1:174301/1‑101 (MQ=255)

                                                      tACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACAtttt                                                <  1:5713193/101‑1 (MQ=255)

                                                       aCCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACAttttt                                               >  1:9422361/1‑101 (MQ=255)

                                                           ctGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaa                                           <  1:10524050/101‑1 (MQ=255)

                                                           ctGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaa                                           >  1:375308/1‑101 (MQ=255)

                                                           ctGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaa                                           <  1:10490482/101‑1 (MQ=255)

                                                              tAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaat                                        >  1:4863150/1‑101 (MQ=255)

                                                               aaaTTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaata                                       <  1:718508/101‑1 (MQ=255)

                                                               aaaTTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaata                                       <  1:9452801/101‑1 (MQ=255)

                                                                aaTTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaataa                                      >  1:10394829/1‑101 (MQ=255)

                                                                 aTTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaataaa                                     >  1:5675211/1‑101 (MQ=255)

                                                                  ttGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaataaaa                                    <  1:1689365/101‑1 (MQ=255)

                                                                  ttGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaataaaa                                    >  1:11410160/1‑101 (MQ=255)

                                                                  ttGTTCTGTTGTTGTCTGTACCAGCGGACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTtaaaataaaa                                    >  1:4348788/1‑101 (MQ=255)

                                                                   tgtctgtttgtggtCTGTCCCGGCGTACGAGAGGGGGCGGATTATAATAAGC‑ACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATg                                  <  1:2512420/94‑1 (MQ=255)

                                                                   tGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTaaaataaaat                                   >  1:8135883/1‑101 (MQ=255)

                                                                    gTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATg                                  <  1:12836030/101‑1 (MQ=255)

                                                                         gttgttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGttt                             <  1:1993634/101‑1 (MQ=255)

                                                                         gttgttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGttt                             >  1:11234236/1‑101 (MQ=255)

                                                                          ttgttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGtttt                            <  1:12660660/101‑1 (MQ=255)

                                                                           tgttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTa                           <  1:4626845/101‑1 (MQ=255)

                                                                           tgttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTa                           <  1:8480736/101‑1 (MQ=255)

                                                                            gttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAg                          <  1:1542010/101‑1 (MQ=255)

                                                                             ttgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGc                         >  1:8601116/1‑101 (MQ=255)

                                                                              tgtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGca                        <  1:5951704/101‑1 (MQ=255)

                                                                               gtCTGTACCAGCGTACGAGATGGCGCGGATggtaatgactcccacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                       <  1:103282‑M2/101‑72 (MQ=255)

                                                                               gtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGcaa                       <  1:8705197/101‑1 (MQ=255)

                                                                               gtCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGcaa                       <  1:12279154/101‑1 (MQ=255)

                                                                               gtCTGAACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGcaa                       <  1:7647924/101‑1 (MQ=255)

                                                                                 cTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACCATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGcaaca                     <  1:497530/101‑1 (MQ=255)

                                                                                   gTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAAt                   >  1:6483642/1‑101 (MQ=255)

                                                                                    tACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATc                  <  1:6303120/101‑1 (MQ=255)

                                                                                     aCCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCa                 <  1:3229752/101‑1 (MQ=255)

                                                                                      ccAGCGTCCGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTATCATTTTTTTAAAATAAAATGAGTTTTAGCACCAATCAg                <  1:10138672/101‑1 (MQ=255)

                                                                                       cAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAgg               >  1:8971071/1‑101 (MQ=255)

                                                                                        aGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAggg              <  1:6719446/101‑1 (MQ=255)

                                                                                         gCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGa             <  1:11572885/101‑1 (MQ=255)

                                                                                           gTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACa           <  1:7727223/101‑1 (MQ=255)

                                                                                           gTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACa           <  1:5820809/101‑1 (MQ=255)

                                                                                           gTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACa           >  1:4289364/1‑101 (MQ=255)

                                                                                           gTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACa           >  1:10813289/1‑101 (MQ=255)

                                                                                            tACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACaa          <  1:4941902/101‑1 (MQ=255)

                                                                                            tACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACaa          <  1:10663117/101‑1 (MQ=255)

                                                                                             aCGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACaaa         <  1:13327216/101‑1 (MQ=255)

                                                                                                 gaTGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAg     <  1:26188/101‑1 (MQ=255)

                                                                                                  aTGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAGa    <  1:8102973/101‑1 (MQ=255)

                                                                                                  aTGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAGa    >  1:7486277/1‑101 (MQ=255)

                                                                                                  aTGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAGa    <  1:3406744/101‑1 (MQ=255)

                                                                                                  aTGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAGa    <  1:9498032/101‑1 (MQ=255)

TTTTGCTACCGCGTTCGGTTTGATGATGGAAAAAGTACGTTCAATAGCCATTTTTACCTCTGTAAATTGTTCTGTTGTTGTCTGTACCAGCGTACGAGATGGCGCGGATTATAATGAGCAACAGGGCCGTTGACTATTGATGAAGGTAACATTTTTTTAAAATAAAATGAGTTTTAGCAACAATCAGGGACAAAACAGACT  >  NC_007779/2643470‑2643670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.