New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3748105NA (NA)277 (1.070) 145/180 NT 100% intergenic (+146/+966) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
?NC_007779 3748643 = 0 (0.000)intergenic (+684/+428) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

Only 100 of 837 total aligned reads displayed.

TAACGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAA  >  NC_007779/3748543‑3748743
                                                                                                    |                                                                                                    
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                      <  1:4384504‑M2/1‑1 (MQ=255)
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                      >  1:2428769‑M2/101‑101 (MQ=255)
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                      >  1:2856318‑M2/101‑101 (MQ=255)
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                      >  1:7698946‑M2/101‑101 (MQ=255)
 tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                     <  1:10584215‑M2/2‑1 (MQ=255)
 tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                     <  1:11832147‑M2/2‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                    <  1:562047‑M2/3‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                    >  1:12850676‑M2/99‑101 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                    >  1:8415183‑M2/99‑101 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                    <  1:2155988‑M2/3‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                    >  1:11712212‑M2/99‑101 (MQ=255)
  aCGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTa                                                                                                    <  1:297326/101‑1 (MQ=255)
   attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCtag                                                                                                   <  1:5926037‑M2/4‑2 (MQ=255)
   attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                   <  1:8626172‑M2/4‑1 (MQ=255)
   attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                   <  1:3628829‑M2/4‑1 (MQ=255)
   attcaaggcacttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                   >  1:3848371‑M2/98‑101 (MQ=255)
    ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaga                                                                                                  <  1:2067224‑M2/5‑3 (MQ=255)
    ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaga                                                                                                  <  1:11061256‑M2/5‑3 (MQ=255)
    ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                  <  1:7832535‑M2/5‑1 (MQ=255)
     tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctagag                                                                                                 >  1:2523340‑M2/96‑98 (MQ=255)
     tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATg                                                                                                 <  1:8961359‑M2/6‑1 (MQ=255)
      caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctagagg                                                                                                <  1:6870553‑M2/7‑5 (MQ=255)
         ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctagaggaga                                                                                             <  1:339975‑M2/10‑8 (MQ=255)
          aaCCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggt                                                                                            >  1:6969345‑M2/1‑94 (MQ=255)
           catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCa                                                                                           >  1:9232544‑M2/90‑101 (MQ=255)
            ccACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGGGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgc                                                                                          <  1:4917889‑M2/101‑10 (MQ=255)
            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctagacgcgctgc                                                                                          >  1:12529445‑M2/89‑91 (MQ=255)
                acgggagaaaaaatcggctcaaacatgaagaaatgaaaagactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCAtt                                                                                      >  1:11496624‑M2/85‑101 (MQ=255)
                  gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAg                                                                                    <  1:5809024‑M2/19‑1 (MQ=255)
                    gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCa                                                                                  <  1:13123350‑M2/21‑1 (MQ=255)
                      gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCaga                                                                                >  1:804497‑M2/79‑101 (MQ=255)
                           aaCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgat                                                                           <  1:2723002‑M2/101‑25 (MQ=255)
                           aaCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgat                                                                           <  1:7232533‑M2/101‑25 (MQ=255)
                            atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGAtata                                                                          >  1:7422401‑M2/73‑101 (MQ=255)
                              gAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatg                                                                        <  1:5275998‑M2/101‑28 (MQ=255)
                                gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCa                                                                      >  1:1929221‑M2/69‑101 (MQ=255)
                                     gCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                 <  1:5069357‑M2/101‑35 (MQ=255)
                                      cTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatg                                                                <  1:3533869‑M2/101‑36 (MQ=255)
                                       tgtgCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                               <  1:6445204‑M2/101‑37 (MQ=255)
                                       catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGa                                                               >  1:7958672‑M2/62‑101 (MQ=255)
                                         tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAgg                                                             >  1:3050663‑M2/60‑101 (MQ=255)
                                         tgCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                             <  1:10364744‑M2/101‑39 (MQ=255)
                                          gCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                            >  1:12238579‑M2/1‑62 (MQ=255)
                                           aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGat                                                           <  1:9381589‑M2/44‑1 (MQ=255)
                                            agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGata                                                          >  1:5211247‑M2/57‑101 (MQ=255)
                                             gATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                         >  1:1002197‑M2/1‑59 (MQ=255)
                                               tCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                       <  1:7532652‑M2/101‑45 (MQ=255)
                                                atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATaga                                                      <  1:6806423‑M2/49‑1 (MQ=255)
                                                 ccGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                     <  1:1651678‑M2/101‑47 (MQ=255)
                                                 ccGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                     >  1:4264709‑M2/1‑55 (MQ=255)
                                                  cGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                    >  1:5483476‑M2/1‑54 (MQ=255)
                                                   aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGaa                                                   <  1:9487801‑M2/52‑1 (MQ=255)
                                                     cAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc                                                 >  1:1431344‑M2/1‑51 (MQ=255)
                                                     cAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatctggagc                                                 <  1:6390478‑M2/101‑51 (MQ=255)
                                                     atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACg                                                 <  1:12972688‑M2/54‑1 (MQ=255)
                                                         ctgagtcagccgagaagaatttccccgcttactcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAgg                                             <  1:1855154‑M2/58‑1 (MQ=255)
                                                         aCGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                             >  1:3184446‑M2/1‑47 (MQ=255)
                                                           gagtcagccgagaaaaatttccccgcttattcgccccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCa                                           >  1:13363250‑M2/42‑101 (MQ=255)
                                                           gTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                           >  1:3922817‑M2/1‑45 (MQ=255)
                                                           gTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                           >  1:10998506‑M2/1‑45 (MQ=255)
                                                           gTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                           >  1:9718716‑M2/1‑45 (MQ=255)
                                                            agtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCaa                                          >  1:2296632‑M2/41‑101 (MQ=255)
                                                                  ccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTaa                                    >  1:6716582‑M2/35‑101 (MQ=255)
                                                                   gCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                   >  1:911796‑M2/1‑37 (MQ=255)
                                                                    gagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAAATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGCTAATa                                  <  1:9886622‑M2/69‑1 (MQ=255)
                                                                    cGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                  <  1:1544216‑M2/101‑66 (MQ=255)
                                                                        agaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGc                              >  1:10142931‑M2/29‑101 (MQ=255)
                                                                        aTAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca                              <  1:13246958‑M2/101‑70 (MQ=255)
                                                                          aatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTg                            >  1:7620485‑M2/27‑101 (MQ=255)
                                                                           aCCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                           <  1:12620593‑M2/101‑73 (MQ=255)
                                                                           aCCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                           >  1:4645991‑M2/1‑29 (MQ=255)
                                                                            tttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGAt                          >  1:1734091‑M2/25‑101 (MQ=255)
                                                                             ccAAATTCCTTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                         <  1:10828375‑M2/101‑75 (MQ=255)
                                                                              tccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATaa                        <  1:736379‑M2/79‑1 (MQ=255)
                                                                              tccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATaa                        <  1:630249‑M2/79‑1 (MQ=255)
                                                                              tccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATaa                        >  1:2582266‑M2/23‑101 (MQ=255)
                                                                              cAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                        >  1:4048031‑M2/1‑26 (MQ=255)
                                                                                aaTTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                      >  1:6526193‑M2/1‑24 (MQ=255)
                                                                                  ttCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                    >  1:6113179‑M2/1‑22 (MQ=255)
                                                                                  cgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGtt                    <  1:1268555‑M2/83‑1 (MQ=255)
                                                                                    cATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                  <  1:7134725‑M2/101‑82 (MQ=255)
                                                                                     aTTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                 <  1:10738902‑M2/101‑83 (MQ=255)
                                                                                      ttGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                >  1:10502599‑M2/1‑18 (MQ=255)
                                                                                       attcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAgg               >  1:8507333‑M2/14‑101 (MQ=255)
                                                                                         tcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGgtg             <  1:5721760‑M2/90‑1 (MQ=255)
                                                                                         atatCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc             <  1:11357586‑M2/101‑87 (MQ=255)
                                                                                          tatCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct            >  1:8271706‑M2/1‑14 (MQ=255)
                                                                                           tcgaaatcactaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt           <  1:11156624‑M2/95‑89 (MQ=255)
                                                                                           atCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt           <  1:11440928‑M2/101‑89 (MQ=255)
                                                                                            caccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTa          <  1:13063364‑M2/93‑1 (MQ=255)
                                                                                             accttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTAc         <  1:4803871‑M2/94‑1 (MQ=255)
                                                                                              gTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc        >  1:3694251‑M2/1‑10 (MQ=255)
                                                                                               cttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCg       >  1:12115628‑M2/6‑101 (MQ=255)
                                                                                                ttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGa      >  1:10911405‑M2/5‑101 (MQ=255)
                                                                                                ttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGa      >  1:12347637‑M2/5‑101 (MQ=255)
                                                                                                 tCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga     >  1:8169957‑M2/1‑7 (MQ=255)
                                                                                                 tCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagccatcaacttaccttcgccga     <  1:4553819‑M2/101‑95 (MQ=255)
                                                                                                  ccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGAtt    <  1:7079235‑M2/99‑1 (MQ=255)
                                                                                                   aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca   >  1:875842‑M2/1‑5 (MQ=255)
                                                                                                    cTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTaa  >  1:10274400/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
TAACGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAA  >  NC_007779/3748543‑3748743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.