New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2411459 =NA (NA)18 (0.100) 17/178 NT 8.8% intergenic (‑148/+14) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
?NC_007779 = 2941347 189 (1.000)intergenic (‑124/+227) gcvA/ygdI DNA‑binding transcriptional dual regulator/hypothetical protein

Only 100 of 251 total aligned reads displayed.

TGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGG  >  NC_007779/2941247‑2941447
                                                                                                    |                                                                                                    
tGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGG                                                                                                      <  1:94007‑M2/101‑1 (MQ=255)
tGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGG                                                                                                      >  1:709431‑M2/1‑101 (MQ=255)
tGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGG                                                                                                      <  1:5776927‑M2/101‑1 (MQ=255)
 gAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGg                                                                                                     >  1:3227020‑M2/1‑100 (MQ=255)
  aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcg                                                                                                    >  1:4859465/1‑101 (MQ=255)
      tAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATTCCTATAGTGGCGGCAc                                                                                                <  1:5877442/101‑1 (MQ=255)
         cAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTc                                                                                             >  1:4740629/1‑101 (MQ=255)
           aTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCt                                                                                           >  1:3622480/1‑101 (MQ=255)
            ttAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTg                                                                                          >  1:3484747/1‑101 (MQ=255)
             tAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaa                                                                                         <  1:4871302‑M2/101‑14 (MQ=255)
             tAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGAACTTCCTGa                                                                                         <  1:7339435/101‑1 (MQ=255)
              aGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAg                                                                                        >  1:1347787/1‑101 (MQ=255)
              aGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAg                                                                                        >  1:7772918/1‑101 (MQ=255)
               gATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGc                                                                                       >  1:3688635/1‑101 (MQ=255)
                 tCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCg                                                                                     <  1:5072930/101‑1 (MQ=255)
                  gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCgg                                                                                    <  1:65872‑M2/28‑1 (MQ=255)
                   acacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGa                                                                                   >  1:4329120/1‑101 (MQ=255)
                   acacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGa                                                                                   >  1:2805404/1‑101 (MQ=255)
                   acacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTAAAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGa                                                                                   <  1:8612211/101‑1 (MQ=255)
                       tATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGa                                                                               <  1:5612048/101‑1 (MQ=255)
                       tATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGa                                                                               <  1:2451848/101‑1 (MQ=255)
                           tAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAg                                                                           >  1:8077863/1‑101 (MQ=255)
                           tAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAg                                                                           <  1:1909234/101‑1 (MQ=255)
                               cTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGtttt                                                                       <  1:6972142/101‑1 (MQ=255)
                                tATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTa                                                                      <  1:2691487/101‑1 (MQ=255)
                                tATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTa                                                                      >  1:8689176/1‑101 (MQ=255)
                                tATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGAAACGAAAAGTTTTa                                                                      >  1:5529467/1‑101 (MQ=255)
                                 aTTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTAt                                                                     >  1:5417910/1‑101 (MQ=255)
                                 aTTAGTTTTTTTAATCTGAGCCATTATAAATTGCCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTAt                                                                     <  1:2828031/101‑1 (MQ=255)
                                  ttAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATc                                                                    <  1:2262925/101‑1 (MQ=255)
                                    aGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCgg                                                                  >  1:1662411/1‑101 (MQ=255)
                                    aGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCgg                                                                  >  1:8058521/1‑101 (MQ=255)
                                    aGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCgg                                                                  >  1:426057/1‑101 (MQ=255)
                                     gTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGa                                                                 <  1:5733753/101‑1 (MQ=255)
                                      tttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGaa                                                                >  1:9489544/1‑101 (MQ=255)
                                        tttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAGTg                                                              <  1:7479692/101‑1 (MQ=255)
                                        tttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATg                                                              >  1:2188465/1‑101 (MQ=255)
                                        tttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATg                                                              <  1:2874422/101‑1 (MQ=255)
                                         ttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGc                                                             <  1:235282/101‑1 (MQ=255)
                                         ttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGc                                                             >  1:5905015/1‑101 (MQ=255)
                                          tttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCg                                                            >  1:2604195/1‑101 (MQ=255)
                                          tttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCg                                                            <  1:1200715/101‑1 (MQ=255)
                                           ttAATCTTAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgt                                                           >  1:7950962/1‑101 (MQ=255)
                                           ttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgt                                                           <  1:8442411/101‑1 (MQ=255)
                                            tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtg                                                          >  1:8905266/1‑101 (MQ=255)
                                            tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtg                                                          <  1:2898588/101‑1 (MQ=255)
                                             aaTCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtgt                                                         >  1:845787/1‑101 (MQ=255)
                                             aaTCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtgt                                                         >  1:5021509/1‑101 (MQ=255)
                                                cTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                      <  1:7652340‑M2/101‑49 (MQ=255)
                                                cTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCt                                                      <  1:6389126/101‑1 (MQ=255)
                                                cTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCt                                                      <  1:5707694/101‑1 (MQ=255)
                                                   aGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGt                                                   <  1:3976332/101‑1 (MQ=255)
                                                     ccATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGa                                                 >  1:6834797/1‑101 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                >  1:6470283/1‑101 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                <  1:1284059/101‑1 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                >  1:374333/1‑101 (MQ=255)
                                                      cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                                >  1:9291090/1‑101 (MQ=255)
                                                       catcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGGTTTATCGGAATGCGTGTTCTGGTGAAc                                               >  1:6256562‑M2/37‑101 (MQ=255)
                                                        ttATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                              >  1:7240917‑M2/1‑45 (MQ=255)
                                                        ttATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACt                                              >  1:3577481/1‑101 (MQ=255)
                                                         tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGATCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtt                                             >  1:4770193/1‑101 (MQ=255)
                                                         tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATTCGTGTTCTGGTGAACtt                                             >  1:7538573/1‑101 (MQ=255)
                                                         tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtt                                             >  1:7146372/1‑101 (MQ=255)
                                                          ataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACttt                                            <  1:8520416/101‑1 (MQ=255)
                                                          ataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACttt                                            >  1:1446571/1‑101 (MQ=255)
                                                           taAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtttt                                           <  1:1549122/101‑1 (MQ=255)
                                                            aaaTTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                          <  1:875105‑M2/101‑61 (MQ=255)
                                                            aaaTTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTg                                          <  1:3656072/101‑1 (MQ=255)
                                                                tGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCtt                                      <  1:1632894/101‑1 (MQ=255)
                                                                  tCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTAc                                    >  1:6147717/1‑101 (MQ=255)
                                                                     gTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                                 >  1:3244966/1‑101 (MQ=255)
                                                                     gTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                                 >  1:3833710/1‑101 (MQ=255)
                                                                         taagttggcagcatcaccCCTATAGTGGCGGCACTTCCTTAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTtgtg                             <  1:5994134‑M2/83‑1 (MQ=255)
                                                                          aagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGa                            >  1:4140631‑M2/18‑101 (MQ=255)
                                                                           cTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAt                           <  1:2145409/101‑1 (MQ=255)
                                                                           cTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAt                           >  1:1144251/1‑101 (MQ=255)
                                                                            ttCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgccggatgactttgtcatgcagctccaccgatt                          <  1:7736025‑M2/101‑77 (MQ=255)
                                                                              cTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgtt                        <  1:1838311/101‑1 (MQ=255)
                                                                               tACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttg                       >  1:3071601/1‑101 (MQ=255)
                                                                                aCCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgt                      >  1:5205424/1‑101 (MQ=255)
                                                                                    gCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTATGGCTTACGGTCGTGAtgttgtgttg                  >  1:7015140/1‑101 (MQ=255)
                                                                                        aTACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttgt              <  1:1691103/101‑1 (MQ=255)
                                                                                           ccTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATgttgtgttgttgtgtt           >  1:100569/1‑101 (MQ=255)
                                                                                           ccTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATgttgtgttgttgtgtt           >  1:6766870/1‑101 (MQ=255)
                                                                                            cTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGttt          <  1:4425804/101‑1 (MQ=255)
                                                                                            cTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGttt          >  1:6329366/1‑101 (MQ=255)
                                                                                            cTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGttt          >  1:8234325/1‑101 (MQ=255)
                                                                                            cTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGttt          >  1:6690927/1‑101 (MQ=255)
                                                                                              ataGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGc        >  1:8624056/1‑101 (MQ=255)
                                                                                                 gTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAAt     >  1:1719314/1‑101 (MQ=255)
                                                                                                  tGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAAtt    >  1:6162414/1‑101 (MQ=255)
                                                                                                  tGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAAtt    <  1:1064536/101‑1 (MQ=255)
                                                                                                   ggcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTg   >  1:4922360/1‑101 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  <  1:8179779‑M2/101‑101 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  >  1:6270647‑M2/1‑1 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  <  1:6865378‑M2/101‑101 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  <  1:2343346‑M2/101‑101 (MQ=255)
                                                                                                    ggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc  >  1:3000223‑M2/1‑1 (MQ=255)
                                                                                                    gcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTgg  <  1:8592631/101‑1 (MQ=255)
                                                                                                    gcggcACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTgg  <  1:8931640/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGG  >  NC_007779/2941247‑2941447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.