New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)274 (1.080) 132/178 NT 99.6% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 1 (0.000)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 645 total aligned reads displayed.

GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853
                                                                                                    |                                                                                                    
 cGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTaaa                                                                                                     >  1:1449714/1‑101 (MQ=255)
  gTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAat                                                                                                    >  1:12726634/1‑101 (MQ=255)
  gTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAat                                                                                                    >  1:724923/1‑101 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   >  1:264185‑M2/98‑101 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   >  1:12623410‑M2/98‑101 (MQ=255)
    aaTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAatta                                                                                                  >  1:12096996/1‑101 (MQ=255)
    aaTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAatta                                                                                                  <  1:11342508/101‑1 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 <  1:1965024‑M2/6‑1 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 <  1:6874892‑M2/6‑1 (MQ=255)
      tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT                                                                                                <  1:6589129‑M1/101‑1 (MQ=255)
      tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT                                                                                                <  1:679922‑M1/101‑1 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatc                                                                                                <  1:5794789‑M2/7‑2 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattt                                                                                               >  1:9465360‑M2/94‑101 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                              <  1:5379054‑M2/9‑1 (MQ=255)
         gccgccGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTaga                                                                                             >  1:10005463‑M1/1‑98 (MQ=255)
         ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttatttat                                                                                             >  1:9118238‑M2/92‑101 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataccagatgtctggaaatataggggcaaatccaattatcagga                                                                                            <  1:10215128‑M2/11‑6 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcagga                                                                                            <  1:590174‑M2/11‑6 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcagga                                                                                            <  1:12171785‑M2/11‑6 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcagga                                                                                            >  1:6277370‑M2/91‑96 (MQ=255)
             ccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactgg                                                                                         >  1:2200489‑M1/1‑94 (MQ=255)
               gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       >  1:10630927‑M1/1‑92 (MQ=255)
                aTGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccc                                                                                      >  1:3135856‑M1/1‑91 (MQ=255)
                  ggTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccc                                                                                    >  1:1610982‑M1/1‑89 (MQ=255)
                   gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAgg                                                                                   <  1:8878679‑M2/20‑1 (MQ=255)
                   gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   <  1:3761912‑M1/101‑14 (MQ=255)
                   gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   >  1:4215156‑M1/1‑88 (MQ=255)
                    ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAggg                                                                                  <  1:3889427‑M2/21‑1 (MQ=255)
                       gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCAt                                                                               <  1:7671452‑M2/24‑1 (MQ=255)
                        ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATa                                                                              <  1:2975371‑M2/25‑1 (MQ=255)
                          acgggaatatctgcggcagcgggcttgtaatgggttaagtaataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaaa                                                                            <  1:8781888‑M2/27‑1 (MQ=255)
                             ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACgg                                                                         <  1:5631045‑M2/30‑1 (MQ=255)
                             acgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccag                                                                         <  1:11482763‑M1/101‑24 (MQ=255)
                              gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGa                                                                        >  1:10715450‑M2/71‑101 (MQ=255)
                               gaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagac                                                                       >  1:9554882‑M1/1‑76 (MQ=255)
                                atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGAtt                                                                      <  1:8187627‑M2/33‑1 (MQ=255)
                                atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGAtt                                                                      <  1:2748755‑M2/33‑1 (MQ=255)
                                 aTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaa                                                                     <  1:4744134‑M1/101‑28 (MQ=255)
                                 aTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaa                                                                     >  1:10378672‑M1/1‑74 (MQ=255)
                                  tttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaac                                                                    <  1:5552399‑M1/101‑29 (MQ=255)
                                  atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTgg                                                                    >  1:10087232‑M2/67‑101 (MQ=255)
                                    tGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacca                                                                  <  1:4655147‑M1/101‑31 (MQ=255)
                                    tGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacca                                                                  <  1:1254938‑M1/101‑31 (MQ=255)
                                      cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaat                                                                <  1:4002472‑M1/101‑33 (MQ=255)
                                       cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGta                                                               >  1:6252063‑M2/62‑101 (MQ=255)
                                       aCCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaata                                                               <  1:7482886‑M1/101‑34 (MQ=255)
                                         gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatctaggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtata                                                             <  1:8086411‑M2/42‑1 (MQ=255)
                                         gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtata                                                             <  1:4537154‑M2/42‑1 (MQ=255)
                                         cGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatc                                                             >  1:354405‑M1/1‑66 (MQ=255)
                                              gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                        <  1:10536456‑M2/47‑1 (MQ=255)
                                              gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                        >  1:11185481‑M2/55‑101 (MQ=255)
                                              ctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactta                                                        <  1:3395395‑M1/101‑41 (MQ=255)
                                               tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       <  1:3188141‑M1/101‑42 (MQ=255)
                                               ggcttgtaatgggttaagtgataacatatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGccgct                                                       >  1:8403213‑M2/54‑99 (MQ=255)
                                                gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTc                                                      >  1:9200206‑M2/53‑101 (MQ=255)
                                                 cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTcc                                                     <  1:7756397‑M2/50‑1 (MQ=255)
                                                 cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTcc                                                     >  1:11777758‑M2/52‑101 (MQ=255)
                                                     tgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagt                                                 >  1:10307236‑M1/1‑54 (MQ=255)
                                                     tgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagt                                                 <  1:5222072‑M1/101‑48 (MQ=255)
                                                     taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCGAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                 >  1:11289045‑M2/48‑101 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                <  1:5029075‑M1/101‑49 (MQ=255)
                                                       atgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAaga                                               >  1:8315147‑M2/46‑101 (MQ=255)
                                                        tgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAagag                                              >  1:7573686‑M2/45‑101 (MQ=255)
                                                         tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                             <  1:441768‑M1/101‑52 (MQ=255)
                                                         tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                             <  1:11689781‑M1/101‑52 (MQ=255)
                                                           cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                           <  1:4457890‑M1/101‑54 (MQ=255)
                                                           cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                           >  1:7086399‑M1/1‑48 (MQ=255)
                                                            ttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGc                                          >  1:1353145‑M2/41‑101 (MQ=255)
                                                               tCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                       <  1:9582134‑M1/101‑58 (MQ=255)
                                                                gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                      <  1:1189401‑M2/65‑1 (MQ=255)
                                                                  tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                    <  1:12827752‑M1/101‑61 (MQ=255)
                                                                   ataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgtg                                   <  1:9761220‑M2/68‑1 (MQ=255)
                                                                    taacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGGAGAGATGCCGCTgtgt                                  >  1:10815348‑M2/33‑101 (MQ=255)
                                                                    taacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTgtgt                                  >  1:2414557‑M2/33‑101 (MQ=255)
                                                                     cGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta                                 >  1:6038203‑M1/1‑38 (MQ=255)
                                                                      gACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag                                >  1:6362664‑M1/1‑37 (MQ=255)
                                                                        cAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt                              >  1:2314415‑M1/1‑35 (MQ=255)
                                                                            gtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCg                          >  1:2560927‑M2/25‑101 (MQ=255)
                                                                            cTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                          >  1:6527836‑M1/1‑31 (MQ=255)
                                                                               aCCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                       <  1:12387944‑M1/101‑74 (MQ=255)
                                                                                  aaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCa                    >  1:735427‑M2/19‑101 (MQ=255)
                                                                                    cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                  <  1:9327624‑M1/101‑79 (MQ=255)
                                                                                    cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                  <  1:10960358‑M1/101‑79 (MQ=255)
                                                                                    cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                  <  1:1750544‑M1/101‑79 (MQ=255)
                                                                                       aTTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt               <  1:1141996‑M1/101‑82 (MQ=255)
                                                                                       aTTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt               >  1:12240830‑M1/1‑20 (MQ=255)
                                                                                       aTTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt               >  1:11981608‑M1/1‑20 (MQ=255)
                                                                                        tttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg              >  1:4978986‑M1/1‑19 (MQ=255)
                                                                                        tttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg              >  1:6694319‑M1/1‑19 (MQ=255)
                                                                                         ggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTAt             <  1:11082075‑M2/90‑1 (MQ=255)
                                                                                          tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga            <  1:8989030‑M1/101‑85 (MQ=255)
                                                                                             caaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTc         >  1:1680520‑M2/8‑101 (MQ=255)
                                                                                              gCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac        >  1:9843814‑M1/1‑13 (MQ=255)
                                                                                              aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCa        >  1:12452222‑M2/7‑101 (MQ=255)
                                                                                                aGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag      <  1:7918927‑M1/101‑91 (MQ=255)
                                                                                                 tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc     <  1:4848808‑M2/98‑1 (MQ=255)
                                                                                                  tAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat    >  1:69856‑M1/1‑9 (MQ=255)
                                                                                                  tAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat    <  1:6464837‑M1/101‑93 (MQ=255)
                                                                                                   cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc   <  1:2073733‑M2/100‑1 (MQ=255)
                                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt  <  1:3257166‑M2/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.