BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	3987186 =	NA (NA)	239 (0.950)	130/178	NT	100%	intergenic (‑732/‑31)	slp/insH	outer membrane lipoprotein/IS5 transposase and trans‑activator
*	?	NC_007779	= 4009203	0 (0.000)	239 (0.950)	130/178	NT	100%	coding (1379/1623 nt)	yhiJ	hypothetical protein

Only 100 of 276 total aligned reads displayed.

TGTTGAAAATAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA  >  NC_007779/3987086‑3987278

 gTTGAAAATAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTaagga                                                                                             >  1:902833/1‑101 (MQ=255)

   tGAAAATAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTaaggaag                                                                                           >  1:1898352/1‑101 (MQ=255)

      aaaTAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTg                                                                                        <  1:10737410/101‑1 (MQ=255)

      aaaTAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTg                                                                                        <  1:6453453/101‑1 (MQ=255)

      aaaTAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTg                                                                                        >  1:10525558/1‑101 (MQ=255)

       aaTAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGc                                                                                       <  1:1288371/101‑1 (MQ=255)

       aaTAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGc                                                                                       <  1:397794/101‑1 (MQ=255)

        aTAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCg                                                                                      <  1:9372928/101‑1 (MQ=255)

         tAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGa                                                                                     >  1:6058792/1‑101 (MQ=255)

          aaaCCTTTGATTTTTTTGTTAAGATATTGTCCCTCTTTATATAATTTGGGGGTAAGGTGTTCTTTATGTAAAAAAAATAGTGTCACCTAAGGAAGGTGCGa                                                                                     <  1:3641759/101‑1 (MQ=255)

           aaCCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAAc                                                                                   >  1:5753168/1‑101 (MQ=255)

           aaCCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGCGCGAAc                                                                                   >  1:11899580/1‑101 (MQ=255)

            aCCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACa                                                                                  >  1:10926715/1‑101 (MQ=255)

            aCCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACa                                                                                  >  1:7723405/1‑101 (MQ=255)

            aCCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAAGGGCGGACa                                                                                  >  1:9167241/1‑101 (MQ=255)

             ccTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACaa                                                                                 >  1:10411548/1‑101 (MQ=255)

              cTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAg                                                                                >  1:8755246/1‑101 (MQ=255)

               ttCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCGCCTAAGGAAGGTGCGAACAAGt                                                                               <  1:4039713/101‑1 (MQ=255)

               ttCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGt                                                                               <  1:8485891/101‑1 (MQ=255)

               ttCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGt                                                                               >  1:9549392/1‑101 (MQ=255)

               ttCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGt                                                                               <  1:2339213/101‑1 (MQ=255)

                 cGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTcc                                                                             <  1:8235168/101‑1 (MQ=255)

                  gATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTccc                                                                            <  1:10607558/101‑1 (MQ=255)

                  gATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTccc                                                                            <  1:4423631/101‑1 (MQ=255)

                  gATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGGGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTccc                                                                            >  1:2616385/1‑101 (MQ=255)

                     ttgtttgtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGa                                                                         >  1:12113519/1‑101 (MQ=255)

                      tgtttgtCAAGATATTGTCCNNNTTTATATAATTTGGGGGTAGGNTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGat                                                                        >  1:12222596/1‑101 (MQ=255)

                      tgtttgtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGat                                                                        >  1:4755687/1‑101 (MQ=255)

                      tgtttgtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGat                                                                        >  1:8659404/1‑101 (MQ=255)

                       gtttgtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGata                                                                       >  1:6972803/1‑101 (MQ=255)

                        tttgtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGatat                                                                      <  1:3801222/101‑1 (MQ=255)

                          tgtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATga                                                                    <  1:3835790/101‑1 (MQ=255)

                           gtCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATgag                                                                   <  1:12891513/101‑1 (MQ=255)

                             cAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGAt                                                                 <  1:7671176/101‑1 (MQ=255)

                              aaGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATc                                                                >  1:4961071/1‑101 (MQ=255)

                               aGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCa                                                               <  1:2274221/101‑1 (MQ=255)

                                gATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCAt                                                              >  1:593449/1‑101 (MQ=255)

                                  tatTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGt                                                            >  1:5820421/1‑101 (MQ=255)

                                   atTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGtt                                                           <  1:7451791/101‑1 (MQ=255)

                                    ttGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGttt                                                          >  1:3116542/1‑101 (MQ=255)

                                    ttGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGttt                                                          >  1:7929100/1‑101 (MQ=255)

                                     tGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTg                                                         >  1:8349038/1‑101 (MQ=255)

                                     tGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTg                                                         <  1:6814026/101‑1 (MQ=255)

                                      gTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGt                                                        <  1:8872631/101‑1 (MQ=255)

                                      gTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGt                                                        >  1:2076553/1‑101 (MQ=255)

                                       tCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTc                                                       <  1:11664976/101‑1 (MQ=255)

                                       tCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTc                                                       >  1:11572974/1‑101 (MQ=255)

                                          aTCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATc                                                    >  1:6410512/1‑101 (MQ=255)

                                           tCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATACGAGATCATGTTTGTCATCt                                                   <  1:2459125/101‑1 (MQ=255)

                                           tCTTTATATAATTTGGGGGCAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCt                                                   >  1:112151/1‑101 (MQ=255)

                                             tttATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTgg                                                 >  1:6217045/1‑101 (MQ=255)

                                              ttATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGa                                                >  1:10687357/1‑101 (MQ=255)

                                               tatataATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAAATCATGTTTGTCATCTGGAg                                               >  1:12586331/1‑101 (MQ=255)

                                                atataATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGc                                              <  1:5470695/101‑1 (MQ=255)

                                                 tataATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGcc                                             <  1:1475156/101‑1 (MQ=255)

                                                  ataATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCa                                            <  1:5059933/101‑1 (MQ=255)

                                                   taATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAt                                           >  1:6601111/1‑101 (MQ=255)

                                                    aaTTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATa                                          <  1:1366857/101‑1 (MQ=255)

                                                    aaTTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATa                                          >  1:806062/1‑101 (MQ=255)

                                                     aTTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAg                                         >  1:7575222/1‑101 (MQ=255)

                                                     aTTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAg                                         <  1:1023038/101‑1 (MQ=255)

                                                     aTTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAg                                         >  1:1598405/1‑101 (MQ=255)

                                                      tttGGGGGTAGGGTGTTCTTTATGT‑‑AAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGaa                                       >  1:5002683/1‑101 (MQ=255)

                                                       ttGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGaa                                       <  1:9623944/101‑1 (MQ=255)

                                                        tGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAc                                      <  1:10318129/101‑1 (MQ=255)

                                                         gggggTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACa                                     <  1:2147755/101‑1 (MQ=255)

                                                          ggggTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAg                                    >  1:7211210/1‑101 (MQ=255)

                                                              tAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGtt                                >  1:7158288/1‑101 (MQ=255)

                                                              tAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGtt                                <  1:11254566/101‑1 (MQ=255)

                                                              tAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGtt                                <  1:8291873/101‑1 (MQ=255)

                                                                gggTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtca                              <  1:4801793/101‑1 (MQ=255)

                                                                gggTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtca                              >  1:1264635/1‑101 (MQ=255)

                                                                gggTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtca                              >  1:9685458/1‑101 (MQ=255)

                                                                 ggTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtcat                             >  1:3153666/1‑101 (MQ=255)

                                                                    gtTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTcatcat                          >  1:12330197/1‑101 (MQ=255)

                                                                      tCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGa                        >  1:5197801/1‑101 (MQ=255)

                                                                         ttATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc                     <  1:9298709/101‑1 (MQ=255)

                                                                          tATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtca                    >  1:10164352/1‑101 (MQ=255)

                                                                          tATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtca                    >  1:5401192/1‑101 (MQ=255)

                                                                          tATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtca                    <  1:1509751/101‑1 (MQ=255)

                                                                            tGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtcatc                  >  1:991392/1‑101 (MQ=255)

                                                                            tGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtcatc                  >  1:2820406/1‑101 (MQ=255)

                                                                             gT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtcatca                 <  1:11145964/101‑1 (MQ=255)

                                                                             gT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtcatca                 <  1:12474845/101‑1 (MQ=255)

                                                                              t‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCaa                >  1:9725970/1‑101 (MQ=255)

                                                                                aaaaaaaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAc               <  1:10014780/101‑1 (MQ=255)

                                                                                 aaaaaaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACt              >  1:372768/1‑101 (MQ=255)

                                                                                 aaaaaaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACt              <  1:5559752/101‑1 (MQ=255)

                                                                                  aaaaaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACtt             <  1:10419428/101‑1 (MQ=40)

                                                                                   aaaaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTa            >  1:4232973/1‑101 (MQ=40)

                                                                                    aaaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTAc           >  1:287751/1‑101 (MQ=39)

                                                                                     aaTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTAcc          >  1:1975774/1‑101 (MQ=38)

                                                                                      aTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCt         >  1:11420400/1‑101 (MQ=37)

                                                                                      aTAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCt         <  1:4949795/101‑1 (MQ=37)

                                                                                      aTAGTGTCACCTAAGGAAGGCGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCt         >  1:3693754/1‑101 (MQ=37)

                                                                                         gtgtCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCg      >  1:4641023/1‑101 (MQ=33)

                                                                                          tgtCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGc     >  1:3460764/1‑101 (MQ=32)

                                                                                          tgtCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGc     <  1:1164228/101‑1 (MQ=32)

                                                                                            tCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCg   <  1:8679078/101‑1 (MQ=31)

                                                                                             cACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGa  >  1:3555916/1‑101 (MQ=11)

TGTTGAAAATAAACCTTCGATTTGTTTGTCAAGATATTGTCCATCTTTATATAATTTGGGGGTAGGGTGTTCTTTATGT‑AAAAAAATAGTGTCACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA  >  NC_007779/3987086‑3987278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.