New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2411458 =NA (NA)265 (1.040) 144/180 NT 97.4% intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
?NC_007779 = 2985055 7 (0.030)coding (553/1230 nt) yqeG transporter

Only 100 of 609 total aligned reads displayed.

GGTAATGGGATTTTTGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATAGACAG  >  NC_007779/2984955‑2985155
                                                                                                    |                                                                                                    
ggTAATGGGATTTTTGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTag                                                                                                      <  1:9110688/101‑1 (MQ=255)
   aacagcagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGt                                                                                                   <  1:1503630‑M2/12‑1 (MQ=255)
    acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGtt                                                                                                  <  1:1819472‑M2/13‑1 (MQ=255)
    acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGtt                                                                                                  <  1:12104555‑M2/13‑1 (MQ=255)
      aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCa                                                                                                >  1:6337360‑M2/87‑101 (MQ=255)
       ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCaa                                                                                               >  1:6043903‑M2/86‑101 (MQ=255)
       ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCaa                                                                                               <  1:6168801‑M2/16‑1 (MQ=255)
         agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATc                                                                                             <  1:1636377‑M2/18‑1 (MQ=255)
          tttttGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgact                                                                                            <  1:3380566‑M2/101‑11 (MQ=255)
           ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAg                                                                                           >  1:5657974‑M2/82‑101 (MQ=255)
           ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAg                                                                                           >  1:6408923‑M2/82‑101 (MQ=255)
           ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAg                                                                                           >  1:7103690‑M2/82‑101 (MQ=255)
              tGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaa                                                                                        >  1:4857220‑M2/1‑87 (MQ=255)
              tGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaa                                                                                        >  1:5004931‑M2/1‑87 (MQ=255)
                gTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaact                                                                                      <  1:2300897‑M2/101‑17 (MQ=255)
                 ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATAcc                                                                                     >  1:10493384‑M2/76‑101 (MQ=255)
                  aTTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaactta                                                                                    <  1:5242391‑M2/101‑19 (MQ=255)
                    tCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttatt                                                                                  >  1:3736073‑M2/1‑81 (MQ=255)
                     tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTc                                                                                 <  1:7621037‑M2/30‑1 (MQ=255)
                      agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCa                                                                                <  1:4446389‑M2/31‑1 (MQ=255)
                       cATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgat                                                                               >  1:924235‑M2/1‑78 (MQ=255)
                        attgattgCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgata                                                                              >  1:9026455‑M2/1‑77 (MQ=255)
                         ttgattgCCTATTTCTTATTTCTTTCCATTTCCCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatag                                                                             >  1:2623524‑M2/1‑76 (MQ=255)
                         aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCa                                                                             >  1:1377114‑M2/68‑101 (MQ=255)
                         aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCa                                                                             <  1:2984234‑M2/34‑1 (MQ=255)
                            attgCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgt                                                                          <  1:5585511‑M2/101‑29 (MQ=255)
                             ttgCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgtt                                                                         >  1:811474‑M2/1‑72 (MQ=255)
                             gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGata                                                                         <  1:10249903‑M2/38‑1 (MQ=255)
                                  cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGat                                                                    <  1:4084768‑M2/43‑1 (MQ=255)
                                   atttcttatttcttTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgt                                                                   <  1:12189329‑M2/101‑36 (MQ=255)
                                     ttcttatttcttTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttc                                                                 <  1:5436999‑M2/101‑38 (MQ=255)
                                     tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATc                                                                 <  1:9473350‑M2/46‑1 (MQ=255)
                                      tcttatttcttTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttca                                                                >  1:11127595‑M2/1‑63 (MQ=255)
                                       gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGa                                                               <  1:12042449‑M2/48‑1 (MQ=255)
                                        ttatttcttTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcaga                                                              <  1:10334525‑M2/101‑41 (MQ=255)
                                        agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGAt                                                              <  1:4550972‑M2/49‑1 (MQ=255)
                                           tttctttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataa                                                           <  1:2479286‑M2/101‑44 (MQ=255)
                                           tttctttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttactgatagtgttttatgttcagataa                                                           >  1:8781746‑M2/1‑58 (MQ=255)
                                             tctttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                         >  1:11772656‑M2/1‑56 (MQ=255)
                                             ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCg                                                         >  1:5127425‑M2/48‑101 (MQ=255)
                                              ctttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                        <  1:3483127‑M2/101‑47 (MQ=255)
                                               tttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                       >  1:9799990‑M2/1‑54 (MQ=255)
                                                ttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                      <  1:11562650‑M2/101‑49 (MQ=255)
                                                ttcCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                      >  1:10821205‑M2/1‑53 (MQ=255)
                                                aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGa                                                      >  1:2838540‑M2/45‑101 (MQ=255)
                                                   cATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                   >  1:4222608‑M2/1‑50 (MQ=255)
                                                   cATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                   >  1:2731967‑M2/1‑50 (MQ=255)
                                                   cATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                   >  1:1893787‑M2/1‑50 (MQ=255)
                                                    aTTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                  >  1:10690478‑M2/1‑49 (MQ=255)
                                                    aTTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                  >  1:8240603‑M2/1‑49 (MQ=255)
                                                      ttACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                <  1:10640665‑M2/101‑55 (MQ=255)
                                                       ccatcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGtttt                                               <  1:3627813‑M2/64‑1 (MQ=255)
                                                         atcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCg                                             >  1:8890077‑M2/36‑101 (MQ=255)
                                                         atcatacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCg                                             <  1:721910‑M2/66‑1 (MQ=255)
                                                             tacactaaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCtt                                         >  1:9648562‑M2/32‑101 (MQ=255)
                                                             gTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                         >  1:769591‑M2/1‑40 (MQ=255)
                                                                ggTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                      >  1:12410856‑M2/1‑37 (MQ=255)
                                                                 gTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                     >  1:6609223‑M2/1‑36 (MQ=255)
                                                                  taaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGcc                                    >  1:8604895‑M2/27‑101 (MQ=255)
                                                                   aaatcagtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCa                                   >  1:7329983‑M2/26‑101 (MQ=255)
                                                                   aGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                   <  1:9377406‑M2/101‑68 (MQ=255)
                                                                   aGTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                   <  1:6792865‑M2/101‑68 (MQ=255)
                                                                    gTTGGCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                  >  1:8372305‑M2/1‑33 (MQ=255)
                                                                     atcaggaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCCCCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATa                                 <  1:3275600‑M2/78‑1 (MQ=255)
                                                                      tcagtaagttggcagcatcagcCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATAc                                <  1:12586364‑M2/79‑1 (MQ=255)
                                                                        gCAACCTGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                              <  1:6919388‑M2/101‑73 (MQ=255)
                                                                        agtaagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGc                              >  1:11254724‑M2/21‑101 (MQ=255)
                                                                           aagttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCCCCTTTAGCCATACGCGCa                           <  1:8436309‑M2/84‑1 (MQ=255)
                                                                             gttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCatt                         <  1:12676308‑M2/86‑1 (MQ=255)
                                                                             gttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCatt                         >  1:11321978‑M2/16‑101 (MQ=255)
                                                                              ttggcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCatta                        <  1:10075012‑M2/87‑1 (MQ=255)
                                                                              tGATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                        <  1:5864820‑M2/101‑79 (MQ=255)
                                                                               gATCTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                       <  1:953933‑M2/101‑80 (MQ=255)
                                                                                 gcagcatcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTAttt                     <  1:3122452‑M2/90‑1 (MQ=255)
                                                                                  cTATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                    <  1:6719992‑M2/101‑83 (MQ=255)
                                                                                   tATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagttaatgcccgatgactttgtcatgcagctccaccgattttgaga                   >  1:7959047‑M2/1‑18 (MQ=255)
                                                                                   tATTAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                   >  1:12924346‑M2/1‑18 (MQ=255)
                                                                                     catcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTAc                 >  1:7773209‑M2/8‑101 (MQ=255)
                                                                                      tAACAACCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                <  1:11448943‑M2/101‑87 (MQ=255)
                                                                                      atcaccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACg                >  1:8688862‑M2/7‑101 (MQ=255)
                                                                                        caccCCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGtt              >  1:3994238‑M2/5‑101 (MQ=255)
                                                                                        acaacCCAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac              <  1:4763766‑M2/101‑89 (MQ=255)
                                                                                          ttgcaatagcgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag            <  1:5918427‑M2/91‑91 (MQ=255)
                                                                                            cccAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg          <  1:127907‑M2/101‑93 (MQ=255)
                                                                                            cccAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg          >  1:12316967‑M2/1‑9 (MQ=255)
                                                                                             ccAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga         >  1:4289868‑M2/1‑8 (MQ=255)
                                                                                             ccAGGTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga         <  1:8842656‑M2/101‑94 (MQ=255)
                                                                                             ccAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCa         <  1:5280281/101‑1 (MQ=255)
                                                                                             caatagcgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga         <  1:2130978‑M2/94‑94 (MQ=255)
                                                                                              cAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCAt        <  1:11016229/101‑1 (MQ=255)
                                                                                              aatagcgggtaatgactccaacttgttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac        >  1:1957757‑M2/7‑7 (MQ=255)
                                                                                               atagcgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact       <  1:4653173‑M2/96‑96 (MQ=255)
                                                                                                ggTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATag      <  1:11643380/101‑1 (MQ=255)
                                                                                                 gTAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc     >  1:7542240‑M2/1‑4 (MQ=255)
                                                                                                 gTAGAGTTCAATCAGAATGCCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATaga     <  1:11877754/101‑1 (MQ=255)
                                                                                                 gTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATaga     >  1:5789013/1‑101 (MQ=255)
                                                                                                  tAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATagac    <  1:1000273/101‑1 (MQ=255)
                                                                                                  tAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATagac    >  1:11925899/1‑101 (MQ=255)
                                                                                                  gcgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc    <  1:2341391‑M2/99‑99 (MQ=255)
                                                                                                  gcgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc    <  1:175135‑M2/99‑99 (MQ=255)
                                                                                                    |                                                                                                    
GGTAATGGGATTTTTGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATAGACAG  >  NC_007779/2984955‑2985155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.