New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)255 (0.980) 133/178 NT 98.1% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 5 (0.020)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 728 total aligned reads displayed.

GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853
                                                                                                    |                                                                                                    
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:12775052‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:3527834‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:150502‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:9184472‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:11206909‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:7520502‑M2/101‑101 (MQ=255)
 ggTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTaaa                                                                                                     <  1:1065539/100‑1 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:3148995‑M2/100‑101 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     <  1:2183089‑M2/2‑1 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcaaa                                                                                                     >  1:1255578‑M2/100‑101 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:10339153‑M2/3‑1 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:3719345‑M2/3‑1 (MQ=255)
   tAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAatt                                                                                                   <  1:9495444/101‑1 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   >  1:12867164‑M2/98‑101 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   <  1:8347514‑M2/4‑1 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgagttaagtgataacagatgtctggaaatataggggcaaatccaatc                                                                                                   <  1:9068917‑M2/4‑2 (MQ=255)
    gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatta                                                                                                  <  1:8093516‑M2/5‑1 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 <  1:2420836‑M2/6‑1 (MQ=255)
     aTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAattat                                                                                                 >  1:13067280/1‑101 (MQ=255)
     aTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAattat                                                                                                 <  1:4895043/101‑1 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgcta                                                                                               <  1:7678018‑M2/8‑6 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgcta                                                                                               <  1:3898282‑M2/8‑6 (MQ=255)
       cTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTa                                                                                               <  1:5595717‑M1/101‑2 (MQ=255)
        tGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTag                                                                                              >  1:3024889‑M1/1‑99 (MQ=255)
        tGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTag                                                                                              >  1:1720310‑M1/1‑99 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcag                                                                                              >  1:4096302‑M2/93‑98 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                              >  1:6976856‑M2/93‑101 (MQ=255)
         ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatc                                                                                             <  1:9788144‑M2/10‑8 (MQ=255)
         ctgggtgatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggtttagtgataacagatgtctggaaatataggggcaaatccaattatcagg                                                                                             >  1:11513525‑M2/92‑97 (MQ=255)
            ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatcgct                                                                                          <  1:13150542‑M2/13‑11 (MQ=255)
            gccgATGGTGATGGCGAACGAATTTGCACGGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                          >  1:7781076‑M1/1‑95 (MQ=255)
            gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                          >  1:2777127‑M1/1‑95 (MQ=255)
               tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaaatat                                                                                       >  1:10061804‑M2/86‑91 (MQ=255)
               gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       >  1:9426543‑M1/1‑92 (MQ=255)
               gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       >  1:10504081‑M1/1‑92 (MQ=255)
                         cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                             <  1:6810734‑M2/26‑1 (MQ=255)
                           gaacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcc                                                                           <  1:1184167‑M1/101‑22 (MQ=255)
                           gaacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcc                                                                           >  1:5492182‑M1/1‑80 (MQ=255)
                           cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                           >  1:4441325‑M2/74‑101 (MQ=255)
                            aacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcca                                                                          >  1:5742240‑M1/1‑79 (MQ=255)
                               gaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagac                                                                       <  1:11967934‑M1/101‑26 (MQ=255)
                                aaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagaca                                                                      <  1:2569611‑M1/101‑27 (MQ=255)
                                 aTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaa                                                                     <  1:5231206‑M1/101‑28 (MQ=255)
                                  atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTgg                                                                    >  1:9679557‑M2/67‑101 (MQ=255)
                                  atctgcggcagcgggcttgtaatgggttaagtgataacagatatctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTgg                                                                    <  1:231362‑M2/35‑1 (MQ=255)
                                    ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGTATAAACGGATTGGCt                                                                  >  1:12242696‑M2/65‑101 (MQ=255)
                                    ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCt                                                                  <  1:873205‑M2/37‑1 (MQ=255)
                                      cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaat                                                                >  1:13281489‑M1/1‑69 (MQ=255)
                                          ggagctggagctGCCTACAGTTCATATCGACAATCCGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                            <  1:10867445‑M1/101‑37 (MQ=255)
                                          cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAg                                                            >  1:11411989‑M2/59‑101 (MQ=255)
                                           gagctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcac                                                           >  1:5140198‑M1/1‑64 (MQ=255)
                                           agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                           <  1:3317835‑M2/44‑1 (MQ=255)
                                           agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                           >  1:12329101‑M2/58‑101 (MQ=255)
                                              gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                        >  1:6408385‑M2/55‑101 (MQ=255)
                                               tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       <  1:6295966‑M1/101‑42 (MQ=255)
                                               ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGt                                                       >  1:732239‑M2/54‑101 (MQ=255)
                                                gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTc                                                      >  1:650222‑M2/53‑101 (MQ=255)
                                                   tgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCg                                                   >  1:1430545‑M2/50‑101 (MQ=255)
                                                     tgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaaaatcacttaaataagt                                                 >  1:9879617‑M1/1‑54 (MQ=255)
                                                      tcctACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                <  1:2652462‑M1/100‑49 (MQ=255)
                                                       ccTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtga                                               <  1:10002416‑M1/101‑50 (MQ=255)
                                                         tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                             <  1:4678771‑M1/101‑52 (MQ=255)
                                                         tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                             <  1:3398815‑M1/101‑52 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccACTTATTTATATGAGCACGGGCATAAACGGATTGGCTGTTTAGCCGGTCCCGAAGAGAt                                            >  1:4362539‑M2/43‑101 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:8480797‑M2/59‑1 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            >  1:7403703‑M2/43‑101 (MQ=255)
                                                                gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                      >  1:8035369‑M2/37‑101 (MQ=255)
                                                                cATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                      >  1:5401636‑M1/1‑43 (MQ=255)
                                                                 tgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGCGATGCCGCtg                                     >  1:3204613‑M2/36‑101 (MQ=255)
                                                                 atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                     >  1:1641662‑M1/1‑42 (MQ=255)
                                                                  gataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgt                                    <  1:5853004‑M2/67‑1 (MQ=255)
                                                                     aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc                                 <  1:4805822‑M2/70‑1 (MQ=255)
                                                                      acagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCa                                <  1:10409815‑M2/71‑1 (MQ=255)
                                                                      acagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCa                                >  1:12724436‑M2/31‑101 (MQ=255)
                                                                       cagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCAc                               <  1:8229360‑M2/72‑1 (MQ=255)
                                                                          aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                            <  1:6014522‑M1/101‑69 (MQ=255)
                                                                          aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                            >  1:9339209‑M1/1‑33 (MQ=255)
                                                                           tCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                           <  1:270653‑M1/101‑70 (MQ=255)
                                                                            gtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCg                          <  1:7896974‑M2/77‑1 (MQ=255)
                                                                             tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         >  1:2067750‑M1/1‑30 (MQ=255)
                                                                             tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         <  1:1860364‑M1/101‑72 (MQ=255)
                                                                              gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        >  1:12657191‑M1/1‑29 (MQ=255)
                                                                               aCCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                       <  1:723229‑M1/101‑74 (MQ=255)
                                                                               aCCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                       >  1:10231489‑M1/1‑28 (MQ=255)
                                                                                 cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta                     >  1:9001184‑M1/1‑26 (MQ=255)
                                                                                  aaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCa                    >  1:3613386‑M2/19‑101 (MQ=255)
                                                                                    atataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAACCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAg                  >  1:298143‑M2/17‑101 (MQ=255)
                                                                                      ataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGc                >  1:11322764‑M2/15‑101 (MQ=255)
                                                                                       taggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCt               <  1:3941785‑M2/88‑1 (MQ=255)
                                                                                          tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga            <  1:612557‑M1/101‑85 (MQ=255)
                                                                                            aTGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttcgactagtcattggaga          <  1:8823500‑M1/101‑87 (MQ=255)
                                                                                            aTGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga          <  1:4154414‑M1/101‑87 (MQ=255)
                                                                                            aTGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga          >  1:4611725‑M1/1‑15 (MQ=255)
                                                                                             caaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCAGTCAAGGCTATGTTc         >  1:11020236‑M2/8‑101 (MQ=255)
                                                                                              gCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac        <  1:7109368‑M1/101‑89 (MQ=255)
                                                                                              aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCa        <  1:11651798‑M2/95‑1 (MQ=255)
                                                                                               cAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca       <  1:6591081‑M1/101‑90 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      <  1:5081174‑M2/97‑1 (MQ=255)
                                                                                                aGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag      >  1:10746426‑M1/1‑11 (MQ=255)
                                                                                                   cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc   <  1:12089667‑M2/100‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.