| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,750,123 | C→T | 3.9% | G122S (GGC→AGC) | tnaA ← | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,750,123 | 0 | C→T | 3.9% | 19.4 ‑0.3 ‑0.1 | 282 | G122S (GGC→AGC) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): new base (6/5): ref base (129/142): total (135/147) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.62e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.85e-01 | ||||||||||
Only 100 of 302 total aligned reads displayed.
ATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATATTT > NC_007779/3750025‑3750223 | taGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttt < 1:5028436/101‑1 (MQ=255) aCGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTcc > 1:3010571/1‑101 (MQ=255) aCGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTcc < 1:3657636/101‑1 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:10350804/101‑1 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:9283106/101‑1 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:4304107/101‑1 (MQ=255) ttACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGc < 1:3527752/101‑1 (MQ=255) gCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑cgc < 1:9628491/101‑1 (MQ=255) gCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑cgc > 1:10025582/1‑101 (MQ=255) cACNGTACAGCCGTTGATCTGGCTATGGCCATGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑cgcg > 1:9030484/1‑101 (MQ=255) cACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑cgcg > 1:11810187/1‑101 (MQ=255) ggTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGttt > 1:12567634/1‑101 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGtttt < 1:5796197/101‑1 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGtttt < 1:3269498/101‑1 (MQ=255) gTACAGCCCTTGATCTGGCTATTGCCCTGCGTGGTCTCAAAGAAATAGCTAGAGAACGCCACCATTTTGCTGCTATCCAGG‑CTTTTTCCTGCT‑CGCGtttt < 1:2759774/101‑1 (MQ=255) tACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCGTGCT‑CGCGttttt > 1:8649885/1‑101 (MQ=255) aCAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGtttttt < 1:10576827/101‑1 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTaa < 1:3439158/101‑1 (MQ=255) gCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAAt > 1:3581174/1‑101 (MQ=255) ccGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATc < 1:4529735/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAg > 1:3854782/1‑101 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAg > 1:9548759/1‑101 (MQ=255) tGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTa > 1:6303618/1‑101 (MQ=255) gATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTAc < 1:5445092/101‑1 (MQ=255) cTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCgg < 1:3178257/101‑1 (MQ=255) cTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCgg > 1:4026454/1‑101 (MQ=255) tGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGGGACCGCCCCATTTTTCCTGGAATCC‑GG‑CTTTTTCCTTCTCCGGGTTTTTTATTCAGACCCGGa > 1:8069337/1‑101 (MQ=255) ggCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGaa < 1:922599/101‑1 (MQ=255) gCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAat > 1:6808845/1‑101 (MQ=255) cTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAata > 1:10975374/1‑101 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAatat < 1:8421496/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGa > 1:7283659/1‑101 (MQ=255) gCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAt > 1:12174452/1‑101 (MQ=255) gCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAt > 1:9952622/1‑101 (MQ=255) cccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAtt < 1:4752077/101‑1 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAttt < 1:7437774/101‑1 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAttt > 1:859055/1‑101 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAttt > 1:9381260/1‑101 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGAttt > 1:13142214/1‑101 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGc < 1:8345674/101‑1 (MQ=255) gCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGct > 1:1298026/1‑101 (MQ=255) gCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGct < 1:2818530/101‑1 (MQ=255) cGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGctc < 1:2257854/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:2301282/1‑101 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:8465740/1‑101 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct < 1:1087360/101‑1 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc > 1:12421289/1‑101 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc < 1:2566139/101‑1 (MQ=255) tCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCa > 1:9708769/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:4216865/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:6550876/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:8753534/1‑101 (MQ=255) aaGAAATAGTTAGAGAACGCCACCATTTTCCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTGCCGGAATATAGATTTGCTCTGCGCCACgg > 1:5186790/1‑101 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc > 1:1518912/1‑101 (MQ=255) gAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGcc > 1:12959218/1‑101 (MQ=255) gAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGcc < 1:1847060/101‑1 (MQ=255) aaaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGccc < 1:4577391/101‑1 (MQ=255) aaaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGccc < 1:11088764/101‑1 (MQ=255) aaaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGccc > 1:8542894/1‑101 (MQ=255) aaaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGccc > 1:1375916/1‑101 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:6909453/101‑1 (MQ=255) aTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg > 1:11959993/1‑101 (MQ=255) aTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg < 1:11660119/101‑1 (MQ=255) tAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTgg < 1:11510570/101‑1 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg < 1:4963688/101‑1 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg < 1:7101308/101‑1 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg > 1:6709749/1‑101 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt < 1:1661291/101‑1 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg > 1:1815993/1‑101 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg > 1:5529179/1‑101 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg < 1:1731353/101‑1 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg < 1:6358148/101‑1 (MQ=255) ccaTTTTGCTGCGATTCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt < 1:7556680/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCTGAATATAGATTTGCTCTGCGCCACGGCCCTGTTGAGTCGGAATGgtgt < 1:8829418/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt < 1:10258963/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt > 1:266535/1‑101 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa < 1:12861502/101‑1 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt < 1:10454228/101‑1 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt > 1:8100520/1‑101 (MQ=255) ttttGCTGCGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAtt > 1:11348137/1‑101 (MQ=255) tttGCTGCGATTCAGG‑CTTTTTCCTGCT‑CTCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTg < 1:3203782/101‑1 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt > 1:10097537/1‑101 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt < 1:3906709/101‑1 (MQ=255) ctgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATaa < 1:1885944/101‑1 (MQ=255) ctgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATaa < 1:10700271/101‑1 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc > 1:2416498/1‑101 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc < 1:546267/101‑1 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc < 1:6010577/101‑1 (MQ=255) gcGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAcc < 1:7786912/101‑1 (MQ=255) cGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa > 1:2488272/1‑101 (MQ=255) cGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa < 1:11284112/101‑1 (MQ=255) cGATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa > 1:4254070/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa < 1:160884/101‑1 (MQ=255) gATCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:2159448/1‑101 (MQ=255) aTCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaaa > 1:12711195/1‑101 (MQ=255) aTCCAGG‑CTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaaa > 1:7945457/1‑101 (MQ=255) aggcTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata < 1:6257814/98‑1 (MQ=255) ggcTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGatat > 1:8979621/3‑101 (MQ=255) ggcTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGatat < 1:2853806/99‑1 (MQ=255) gcTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATAtt < 1:6065683/100‑1 (MQ=255) | ATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCT‑CGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATATTT > NC_007779/3750025‑3750223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |