New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 190728819 (0.070)239 (0.930) 126/180 NT 92.6% intergenic (+315/‑114) yobD/yebN inner membrane protein/inner membrane protein
?NC_007779 2411458 = NA (NA)intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein

Only 100 of 583 total aligned reads displayed.

GTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCGG  >  NC_007779/1907188‑1907388
                                                                                                    |                                                                                                    
   gCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggt                                                                                                   >  1:12053934‑M1/1‑98 (MQ=255)
    ccGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggta                                                                                                  >  1:12137477‑M1/1‑97 (MQ=255)
      gATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaat                                                                                                <  1:3025321‑M1/101‑7 (MQ=255)
      aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacgCCATATGCACATCaa                                                                                                <  1:3997694‑M1/15‑1 (MQ=255)
        gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATc                                                                                              >  1:12351371‑M1/85‑101 (MQ=255)
           ccAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactc                                                                                           <  1:10632484‑M1/101‑12 (MQ=255)
            gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTa                                                                                          <  1:5913387‑M1/21‑1 (MQ=255)
            cAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactcc                                                                                          >  1:9752289‑M1/1‑89 (MQ=255)
              cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGGACATCAATCGCTATg                                                                                        <  1:8941761‑M1/23‑1 (MQ=255)
               agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGc                                                                                       <  1:4223584‑M1/24‑1 (MQ=255)
                ttCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaact                                                                                      >  1:2194483‑M1/1‑85 (MQ=255)
                 ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCt                                                                                     >  1:10043877‑M1/76‑101 (MQ=255)
                  tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg                                                                                    <  1:11143651‑M1/27‑1 (MQ=255)
                     tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATATGCACATCAATCGCTATGCCTGCAt                                                                                 <  1:5533087‑M1/30‑1 (MQ=255)
                     gAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattg                                                                                 <  1:1761319‑M1/101‑22 (MQ=255)
                     gAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattg                                                                                 <  1:1386946‑M1/101‑22 (MQ=255)
                     gAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattg                                                                                 >  1:9674966‑M1/1‑80 (MQ=255)
                      agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATg                                                                                >  1:3845279‑M1/71‑101 (MQ=255)
                      aaaTGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattga                                                                                <  1:13001406‑M1/101‑23 (MQ=255)
                       aaTGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgat                                                                               <  1:10477280‑M1/101‑24 (MQ=255)
                         tGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatag                                                                             >  1:1314840‑M1/1‑76 (MQ=255)
                         aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAc                                                                             >  1:8705033‑M1/68‑101 (MQ=255)
                          gTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagt                                                                            >  1:2777614‑M1/1‑75 (MQ=255)
                          acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcg                                                                            >  1:6263753‑M1/67‑101 (MQ=255)
                           tACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtg                                                                           <  1:3234829‑M1/101‑28 (MQ=255)
                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagatggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcgc                                                                           <  1:5435434‑M1/36‑1 (MQ=255)
                            aCGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgt                                                                          <  1:4150754‑M1/101‑29 (MQ=255)
                            aCGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgt                                                                          <  1:8527789‑M1/101‑29 (MQ=255)
                            aCGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgt                                                                          >  1:641514‑M1/1‑73 (MQ=255)
                             gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGa                                                                         >  1:8258832‑M1/64‑101 (MQ=255)
                                gtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtttta                                                                      <  1:10001306‑M1/101‑33 (MQ=255)
                                gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGaaaa                                                                      >  1:2382299‑M1/61‑101 (MQ=255)
                                 ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAAc                                                                     >  1:1853945‑M1/60‑101 (MQ=255)
                                 ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAAc                                                                     >  1:12447657‑M1/60‑101 (MQ=255)
                                  cAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatg                                                                    <  1:12736051‑M1/101‑35 (MQ=255)
                                   aaCATACTGGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgt                                                                   <  1:11304091‑M1/101‑36 (MQ=255)
                                    ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCAt                                                                  <  1:11006269‑M1/45‑1 (MQ=255)
                                     tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATc                                                                 <  1:6820595‑M1/46‑1 (MQ=255)
                                     cATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttc                                                                 <  1:3771560‑M1/101‑38 (MQ=255)
                                      aTACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttca                                                                <  1:10745777‑M1/101‑39 (MQ=255)
                                        agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACg                                                              >  1:9406175‑M1/53‑101 (MQ=255)
                                        aCTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcaga                                                              >  1:4817368‑M1/1‑61 (MQ=255)
                                          tCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagata                                                            <  1:10283769‑M1/101‑43 (MQ=255)
                                          cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGc                                                            >  1:87798‑M1/51‑101 (MQ=255)
                                          cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTACGCCTGCATGAACGCGAAAACCATCACGGc                                                            >  1:6461643‑M1/51‑101 (MQ=255)
                                           cGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataa                                                           >  1:7298653‑M1/1‑58 (MQ=255)
                                           acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCt                                                           <  1:12676938‑M1/52‑1 (MQ=255)
                                            gTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataat                                                          <  1:5294279‑M1/101‑45 (MQ=255)
                                            cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCtt                                                          <  1:2582550‑M1/53‑1 (MQ=255)
                                            cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCtt                                                          >  1:2696077‑M1/49‑101 (MQ=255)
                                             ttGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatg                                                         >  1:11475848‑M1/1‑56 (MQ=255)
                                             ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCttg                                                         <  1:11911751‑M1/54‑1 (MQ=255)
                                              tGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                        >  1:7030366‑M1/1‑55 (MQ=255)
                                                aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCttgttg                                                      <  1:7754988‑M1/57‑1 (MQ=255)
                                                 aaaaCGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                     <  1:12236522‑M1/101‑50 (MQ=255)
                                                  aaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTgttgtt                                                    >  1:11407828‑M1/43‑101 (MQ=255)
                                                   aacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTc                                                   <  1:194448‑M1/60‑1 (MQ=255)
                                                     caccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCAt                                                 >  1:6546257‑M1/40‑101 (MQ=255)
                                                     caccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCAt                                                 >  1:4747717‑M1/40‑101 (MQ=255)
                                                     caccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCAt                                                 >  1:8427161‑M1/40‑101 (MQ=255)
                                                       tGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                               <  1:2941716‑M1/101‑56 (MQ=255)
                                                            cGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                          >  1:9163367‑M1/1‑41 (MQ=255)
                                                            cGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                          >  1:3398808‑M1/1‑41 (MQ=255)
                                                             tacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCAt                                         >  1:3330557‑M1/32‑101 (MQ=255)
                                                              acactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATg                                        >  1:1616382‑M1/31‑101 (MQ=255)
                                                                 ctaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt                                     <  1:7446109‑M1/74‑1 (MQ=255)
                                                                    aatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCt                                  >  1:8101469‑M1/25‑101 (MQ=255)
                                                                     tGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                 >  1:1087827‑M1/1‑32 (MQ=255)
                                                                       cagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggg                               >  1:7719159‑M1/22‑101 (MQ=255)
                                                                       cagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggg                               >  1:9261580‑M1/22‑101 (MQ=255)
                                                                        agtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTgggg                              >  1:6913100‑M1/21‑101 (MQ=255)
                                                                        aTACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttcttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                              >  1:5738713‑M1/1‑29 (MQ=255)
                                                                          taagttggcagcattaccCCATATGCTCATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGc                            >  1:9490079‑M1/19‑101 (MQ=255)
                                                                          aCTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                            >  1:10196920‑M1/1‑27 (MQ=255)
                                                                            agttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCga                          <  1:7100050‑M1/85‑1 (MQ=255)
                                                                             gttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgat                         >  1:3069330‑M1/16‑101 (MQ=255)
                                                                                ggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatgat                      >  1:7229040‑M1/13‑101 (MQ=255)
                                                                                 gtcagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                     <  1:12882546‑M1/101‑82 (MQ=255)
                                                                                  cagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGAtgt                    <  1:11641190‑M1/91‑1 (MQ=255)
                                                                                   agcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGAtgtg                   >  1:9893146‑M1/10‑101 (MQ=255)
                                                                                     ggCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                 <  1:6155740‑M1/101‑86 (MQ=255)
                                                                                      atcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGttt                <  1:2145379‑M1/95‑1 (MQ=255)
                                                                                          gaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag            <  1:1279080‑M1/101‑91 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           >  1:7819859‑M1/1‑10 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           >  1:4311663‑M1/1‑10 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           <  1:4658766‑M1/101‑92 (MQ=255)
                                                                                            ccATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg          >  1:908336‑M1/1‑9 (MQ=255)
                                                                                            ccATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg          >  1:8812320‑M1/1‑9 (MQ=255)
                                                                                             cATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga         >  1:1506158‑M1/1‑8 (MQ=255)
                                                                                             cATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga         >  1:3492292‑M1/1‑8 (MQ=255)
                                                                                             cATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGAt         >  1:10509336/1‑101 (MQ=255)
                                                                                             cATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGAt         <  1:6634902/101‑1 (MQ=255)
                                                                                              atatGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATa        <  1:4959805/101‑1 (MQ=255)
                                                                                                 tGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc     <  1:3612257‑M1/101‑98 (MQ=255)
                                                                                                 tGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc     <  1:5163395‑M1/101‑98 (MQ=255)
                                                                                                 tGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATAccc     >  1:5083964/1‑101 (MQ=255)
                                                                                                  gCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATAcccc    <  1:4067545/101‑1 (MQ=255)
                                                                                                  gCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATAcccc    >  1:7165668/1‑101 (MQ=255)
                                                                                                   cAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg   >  1:12535854‑M1/1‑2 (MQ=255)
                                                                                                    acaTCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCgg  <  1:5816036/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCGG  >  NC_007779/1907188‑1907388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.