Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_007779 1,301,041 Δ1,336 bp 100% insCinsD insC, insD

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 1301041–1302367 1302376 10–1336 227 [0] [0] 225 insC–insD insC, insD

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 13010400 (0.000)184 (0.840) 110/166 NT 100% intergenic (+218/‑90) ychE/insC inner membrane protein/IS2 element protein
?NC_007779 1302377 = 0 (0.000)intergenic (+19/‑519) insD/oppA IS2 element protein/oligopeptide transporter subunit

Only 100 of 227 total aligned reads displayed.

AGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGT  >  NC_007779/1300940‑1301140
                                                                                                    |                                                                                                    
agttagttATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTA                                                                                                      <  1:3937311‑M1/101‑1 (MQ=255)
agttagttATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTA                                                                                                      <  1:4916126‑M1/101‑1 (MQ=255)
  ttagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAtt                                                                                                    >  1:5445748‑M1/1‑99 (MQ=255)
  ttagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAtt                                                                                                    >  1:6781492‑M1/1‑99 (MQ=255)
    agttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaa                                                                                                  <  1:8106452‑M1/101‑5 (MQ=255)
      ttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaatt                                                                                                >  1:7575121‑M1/1‑95 (MQ=255)
        ataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattcc                                                                                              <  1:8581360‑M1/101‑9 (MQ=255)
        ataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattcc                                                                                              >  1:11867739‑M1/1‑93 (MQ=255)
          aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccac                                                                                            >  1:448964‑M1/1‑91 (MQ=255)
          aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccac                                                                                            >  1:174885‑M1/1‑91 (MQ=255)
          aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccac                                                                                            <  1:10454342‑M1/101‑11 (MQ=255)
           aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccact                                                                                           >  1:11762263‑M1/1‑90 (MQ=255)
           aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccact                                                                                           >  1:3104935‑M1/1‑90 (MQ=255)
           aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccact                                                                                           >  1:5229674‑M1/1‑90 (MQ=255)
            ggATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactg                                                                                          >  1:9141529‑M1/1‑89 (MQ=255)
               tttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcct                                                                                       >  1:5982268‑M1/1‑86 (MQ=255)
                ttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctt                                                                                      >  1:2233667‑M1/1‑85 (MQ=255)
                  ccTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttg                                                                                    <  1:11565628‑M1/101‑19 (MQ=255)
                   cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttgg                                                                                   >  1:9717473‑M1/1‑82 (MQ=255)
                   cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttgg                                                                                   >  1:10610229‑M1/1‑82 (MQ=255)
                    ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggt                                                                                  <  1:8638686‑M1/101‑21 (MQ=255)
                     tAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggta                                                                                 <  1:2914865‑M1/101‑22 (MQ=255)
                        cTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagag                                                                              >  1:1828517‑M1/1‑77 (MQ=255)
                         tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagagg                                                                             >  1:8434793‑M1/1‑76 (MQ=255)
                          gCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagagga                                                                            <  1:7344527‑M1/101‑27 (MQ=255)
                           cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaa                                                                           >  1:7122380‑M1/1‑74 (MQ=255)
                           cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaa                                                                           >  1:722557‑M1/1‑74 (MQ=255)
                            ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaa                                                                          <  1:9027258‑M1/101‑29 (MQ=255)
                            ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaa                                                                          >  1:3423246‑M1/1‑73 (MQ=255)
                              ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagt                                                                        <  1:8099351‑M1/101‑31 (MQ=255)
                                cctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgc                                                                      <  1:10881965‑M1/101‑33 (MQ=255)
                                 ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgct                                                                     >  1:3188904‑M1/1‑68 (MQ=255)
                                  tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgcta                                                                    <  1:1337987‑M1/101‑35 (MQ=255)
                                  tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgcta                                                                    <  1:5014166‑M1/101‑35 (MQ=255)
                                   cACCATCATGTTATTTTCGCCACAACATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagttctaa                                                                   <  1:8521735‑M1/101‑36 (MQ=255)
                                    aCCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaa                                                                  <  1:5931154‑M1/101‑37 (MQ=255)
                                     ccATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaat                                                                 <  1:3350752‑M1/101‑38 (MQ=255)
                                      catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaata                                                                <  1:6379707‑M1/101‑39 (MQ=255)
                                      catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaata                                                                <  1:10251201‑M1/101‑39 (MQ=255)
                                       atcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataa                                                               >  1:6296362‑M1/1‑62 (MQ=255)
                                        tcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataat                                                              <  1:8232235‑M1/101‑41 (MQ=255)
                                         catGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataata                                                             <  1:358912‑M1/101‑42 (MQ=255)
                                          atGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataa                                                            >  1:8804791‑M1/1‑59 (MQ=255)
                                           tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataat                                                           >  1:11092641‑M1/1‑58 (MQ=255)
                                            gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatc                                                          <  1:8318696‑M1/101‑45 (MQ=255)
                                             ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatca                                                         <  1:7833748‑M1/101‑46 (MQ=255)
                                             ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatca                                                         >  1:11887798‑M1/1‑56 (MQ=255)
                                             ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatca                                                         <  1:583125‑M1/101‑46 (MQ=255)
                                              tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaa                                                        >  1:9808106‑M1/1‑55 (MQ=255)
                                                ttttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaatt                                                      <  1:2312899‑M1/101‑49 (MQ=255)
                                                  ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgt                                                    <  1:9539501‑M1/101‑51 (MQ=255)
                                                  ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgt                                                    >  1:9240333‑M1/1‑51 (MQ=255)
                                                  ttCGCCACAGCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgt                                                    <  1:4367438‑M1/101‑51 (MQ=255)
                                                   tCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgtt                                                   <  1:5183997‑M1/101‑52 (MQ=255)
                                                       cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaat                                               <  1:379883‑M1/101‑56 (MQ=255)
                                                         catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaatta                                             <  1:9850121‑M1/101‑58 (MQ=255)
                                                            catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattg                                          >  1:7437770‑M1/1‑41 (MQ=255)
                                                             atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgt                                         >  1:10837097‑M1/1‑40 (MQ=255)
                                                              tAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtg                                        >  1:10294828‑M1/1‑39 (MQ=255)
                                                              tAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtg                                        >  1:9485960‑M1/1‑39 (MQ=255)
                                                                 tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattcttcag                                     <  1:3269912‑M1/101‑66 (MQ=255)
                                                                  ccTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatt                                    <  1:2374116‑M1/101‑67 (MQ=255)
                                                                   cTGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcattt                                   >  1:8907403‑M1/1‑34 (MQ=255)
                                                                    tGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttc                                  >  1:9959327‑M1/1‑33 (MQ=255)
                                                                    tGGGCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttc                                  >  1:3006634‑M1/1‑33 (MQ=255)
                                                                     gggCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttca                                 >  1:1586670‑M1/1‑32 (MQ=255)
                                                                     gggCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttca                                 >  1:2584649‑M1/1‑32 (MQ=255)
                                                                       gCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcctttcact                               >  1:11162004‑M1/1‑30 (MQ=255)
                                                                       gCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcact                               <  1:1415‑M1/101‑72 (MQ=255)
                                                                       gCTTGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcact                               <  1:2457827‑M1/101‑72 (MQ=255)
                                                                         ttGCTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactac                             >  1:7470360‑M1/1‑28 (MQ=255)
                                                                            cTGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactgg                          <  1:1951847‑M1/101‑77 (MQ=255)
                                                                             tGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactgga                         >  1:4424595‑M1/1‑24 (MQ=255)
                                                                             tGAAGAATAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactgga                         >  1:875715‑M1/1‑24 (MQ=255)
                                                                              gaagaaTAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaa                        <  1:646113‑M1/101‑79 (MQ=255)
                                                                                 gaaTAATTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactg                     <  1:11633400‑M1/101‑82 (MQ=255)
                                                                                  aataatTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgt                    <  1:3688575‑M1/101‑83 (MQ=255)
                                                                                  aataatTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgt                    >  1:5318387‑M1/1‑19 (MQ=255)
                                                                                    taatTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaa                  >  1:1549330‑M1/1‑17 (MQ=255)
                                                                                     aatTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaat                 <  1:4452496‑M1/101‑86 (MQ=255)
                                                                                      atTGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                <  1:6635386‑M1/101‑87 (MQ=255)
                                                                                        tGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcag              <  1:4195076‑M1/101‑89 (MQ=255)
                                                                                        tGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcag              <  1:6612650‑M1/101‑89 (MQ=255)
                                                                                        tGAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcag              >  1:7275831‑M1/1‑13 (MQ=255)
                                                                                         gAAATGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcaga             >  1:12074258‑M1/1‑12 (MQ=255)
                                                                                          aaaTGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaa            <  1:9654223‑M1/101‑91 (MQ=255)
                                                                                            aTGATATTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa          <  1:3879717‑M1/101‑93 (MQ=255)
                                                                                               atatTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat       >  1:4508891‑M1/1‑6 (MQ=255)
                                                                                               atatTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat       <  1:9095285‑M1/101‑96 (MQ=255)
                                                                                               atatTAttaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat       <  1:2509928‑M1/101‑96 (MQ=255)
                                                                                                tattattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata      <  1:4703961‑M1/101‑97 (MQ=255)
                                                                                                tattattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata      >  1:3467632‑M1/1‑5 (MQ=255)
                                                                                                tattattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata      >  1:7318866‑M1/1‑5 (MQ=255)
                                                                                                 attattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag     <  1:7620416‑M1/101‑98 (MQ=255)
                                                                                                 attattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag     <  1:3912781‑M1/101‑98 (MQ=255)
                                                                                                  ttattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga    <  1:7893556‑M1/101‑99 (MQ=255)
                                                                                                   tattaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac   >  1:6177512‑M1/1‑2 (MQ=255)
                                                                                                    attaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagaca  >  1:11062967‑M1/1‑1 (MQ=255)
                                                                                                    attaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagaca  <  1:6663666‑M1/101‑101 (MQ=255)
                                                                                                    attaattccactgcctttggtagaggaaagtgctaaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagaca  <  1:4125218‑M1/101‑101 (MQ=255)
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AGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGT  >  NC_007779/1300940‑1301140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.