New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 15391 =NA (NA)19 (0.070) 16/172 NT 7.1% intergenic (+93/‑54) dnaJ/insL chaperone Hsp40, co‑chaperone with DnaK/IS186/IS421 transposase
?NC_007779 = 458023 261 (0.960)intergenic (+99/‑89) clpX/lon ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

Only 100 of 290 total aligned reads displayed.

CCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCA  >  NC_007779/15291‑15485
                                                                                                    |                                                                                              
 ccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGGGGGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCAt                                                                                               <  1:1385372/101‑1 (MQ=255)
  cGCTAACCTCCCCAAAAGCCTGCCCGTGGGTAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATa                                                                                              <  1:8015629/101‑1 (MQ=255)
  cGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCAATCCCCTa                                                                                              >  1:13573868/1‑101 (MQ=255)
  cGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCAGTAAAGTGGCGGGGGTCACTCCCaca                                                                                              >  1:7649625/1‑99 (MQ=255)
     tAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACCCCCCTaaac                                                                                           >  1:10053388/1‑99 (MQ=255)
      aaCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCCCTCCCCTAAgcg                                                                                          >  1:13299708/1‑101 (MQ=255)
         cTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGACACTCCCCTAAGCGCTa                                                                                       >  1:7549803/1‑101 (MQ=255)
           ccccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAACGCTAAc                                                                                     >  1:6258278/1‑101 (MQ=255)
            cccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTGAGTCCCACAAGCGCTAACt                                                                                    >  1:7391479/1‑101 (MQ=255)
            cccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACt                                                                                    <  1:445458/101‑1 (MQ=255)
               aaaaGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTaa                                                                                 <  1:5280332/101‑1 (MQ=255)
               aaaaGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTaa                                                                                 <  1:4838420/101‑1 (MQ=255)
                  aGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTTGCTCCCCGAAGCGCCTACTTAAggg                                                                              >  1:11781336/1‑101 (MQ=255)
                  aGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCCTAAGCGCCAACTTAAggg                                                                              >  1:12757853/1‑101 (MQ=255)
                    ccTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGtt                                                                            <  1:8139307/101‑1 (MQ=255)
                    ccTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGtt                                                                            <  1:5913303/101‑1 (MQ=255)
                     cTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAACGCTAACTTAAGGGTtg                                                                           >  1:5003679/1‑101 (MQ=255)
                      tGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTtgt                                                                          <  1:4930489/101‑1 (MQ=255)
                       gCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAGCGCTAACTTAAGGGGtgtg                                                                         >  1:2670902/1‑101 (MQ=255)
                          cGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTa                                                                      <  1:10942897/101‑1 (MQ=255)
                           gTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTAt                                                                     <  1:10779209/101‑1 (MQ=255)
                           gTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTAt                                                                     <  1:5698313/101‑1 (MQ=255)
                             gggCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACCCCCCTAAACGCCAACTTAAGGGGTGTGGTATTa                                                                   >  1:8855923/1‑101 (MQ=255)
                                cAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAGAGCTCACTTAAGGGTTGTGGTATTAAGc                                                                >  1:2491156/1‑101 (MQ=38)
                                 aGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAGCGCTAACTTAAGGGGTGTGGGATTACGcc                                                               >  1:12443598/1‑101 (MQ=255)
                                  ggCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGGGGGGATCACCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt                                                              <  1:3086202/101‑1 (MQ=255)
                                  ggCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACCCCCCAAAACCCTAACTTAAGGGGTGTGGGATTACGCCt                                                              >  1:3575925/1‑101 (MQ=255)
                                   gCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAACGCTAACTTAAGGGTTGTGGGATTACGCCTg                                                             >  1:12148462/1‑101 (MQ=255)
                                   gCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg                                                             <  1:11304334/101‑1 (MQ=255)
                                    ccTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAACGCTAACTTAAGGGGTGTGGTATTTAGCCTGa                                                            >  1:6956846/1‑101 (MQ=255)
                                     cTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat                                                           >  1:6076165/1‑101 (MQ=255)
                                      tGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGata                                                          <  1:3248206/101‑1 (MQ=255)
                                        ggTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg                                                        <  1:3873403/101‑1 (MQ=255)
                                        ggTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGGTATg                                                        >  1:9598773/1‑101 (MQ=255)
                                           aaaaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt                                                     <  1:11651939/101‑1 (MQ=255)
                                            aaaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt                                                    <  1:1772873/101‑1 (MQ=255)
                                            aaaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCACTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt                                                    <  1:6577905/101‑1 (MQ=255)
                                             aaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGGTATGATTTa                                                   >  1:8271095/1‑101 (MQ=255)
                                             aaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa                                                   <  1:9174628/101‑1 (MQ=255)
                                              aaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCTCTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                  <  1:10333565/101‑1 (MQ=255)
                                              aaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGGTGTGGGATTACGCCTGATATGAtttta                                                  >  1:5245957/1‑99 (MQ=255)
                                                tAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACg                                                <  1:169858/101‑1 (MQ=255)
                                                 aGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt                                               <  1:8537093/101‑1 (MQ=255)
                                                  gggTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg                                              <  1:10589969/101‑1 (MQ=255)
                                                   ggTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                             <  1:13407571/101‑1 (MQ=255)
                                                     tGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCCTAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCg                                           >  1:6837086/1‑101 (MQ=255)
                                                     tGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                           <  1:3595532/101‑1 (MQ=255)
                                                     tGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                           <  1:6182041/101‑1 (MQ=255)
                                                      gCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGa                                          <  1:12258839/101‑1 (MQ=255)
                                                        gTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg                                        <  1:6662343/101‑1 (MQ=255)
                                                         ttGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTTGCTTCCATTATTGCGAACTTAAGGGTTGTGGGATTAACCCTGATAAGATTTAACTTGcccgcga                                       >  1:12661432/1‑96 (MQ=255)
                                                          tGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTTACGTGCCGATGaa                                      >  1:10490431/1‑101 (MQ=255)
                                                          tGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACCCCCCTAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa                                      >  1:3150783/1‑101 (MQ=255)
                                                          tGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCATAAGCGCTAACTTAAGGGGTGTGGGATTACGCCTGATATGATTTTACGTGCCGGTGaa                                      >  1:12697646/1‑101 (MQ=18)
                                                          tGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGACAATCCCCTAAGGGCTAACTTTAAGGTTGTGGTATTACCCCTGATATGATTTAACGTGCCGAGGaa                                      >  1:3747783/1‑101 (MQ=18)
                                                          tGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCAAAAACGCCAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAAGaa                                      >  1:11155964/1‑101 (MQ=21)
                                                           gAAGATATGCGAGCACCTGTAAAGTGGCGGGGAGCACTCCCATAAGAGCTAACTTAAGGGTTGTGGTATTACGCCCGATATAATTTAACGTGCCGATGAAt                                     >  1:2183709/1‑101 (MQ=18)
                                                            aaGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCCCAAGCGCCAACTTTAGGGTTGTGGGATTACGCCTGATATGATTTAACGGGCCGATGAAtt                                    >  1:6695142/1‑101 (MQ=18)
                                                             aGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa                                   <  1:13967583/101‑1 (MQ=255)
                                                              gATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAc                                  <  1:4272477/101‑1 (MQ=255)
                                                                tatGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActc                                <  1:11974800/101‑1 (MQ=255)
                                                                 atGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGGTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTActct                               >  1:7229236/1‑101 (MQ=255)
                                                                   gCGAGCACCTGTAAAGTGGCGGGGATCACTCCCCTAAGCGCCAACTTAAGGGGTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCa                             >  1:8330889/1‑101 (MQ=18)
                                                                   gCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAAAGTGCCGATGAATTAAtctcc                             >  1:3001551/1‑100 (MQ=255)
                                                                     gAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg                           >  1:10650090/1‑101 (MQ=255)
                                                                     gAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAACGCTAACTTTAGGGTTGTGGTATTACGCCTGATATGATTTTACGTGGCGATGAATTACTCTCACg                           >  1:11093921/1‑101 (MQ=18)
                                                                     gAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGGGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTTACGTGCCGATGAAATACTCTCACg                           >  1:10215400/1‑101 (MQ=18)
                                                                     gAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg                           <  1:2415237/101‑1 (MQ=255)
                                                                       gCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAt                         <  1:4053975/101‑1 (MQ=255)
                                                                       gCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAt                         <  1:13758915/101‑1 (MQ=255)
                                                                        cACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATa                        <  1:5607056/101‑1 (MQ=255)
                                                                        cACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATa                        <  1:7832624/101‑1 (MQ=255)
                                                                         aCCTGTAAAGTGGCGGGGGTCACTCCCATAAGGGCTAACTTAAGGGGTGTGGGATTACGCCTGATATGATTTAACGGGCCGATGAATTACTCTCACGATaa                       >  1:6871984/1‑101 (MQ=17)
                                                                          ccTGTAAAGTGGCGGGGATCACTCCCCTAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                      >  1:5206927/1‑101 (MQ=255)
                                                                          ccTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                      <  1:6764475/101‑1 (MQ=255)
                                                                           cTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACt                     <  1:1151224/101‑1 (MQ=255)
                                                                             gTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTgg                   <  1:7875893/101‑1 (MQ=255)
                                                                             gTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTgg                   <  1:14188519/101‑1 (MQ=255)
                                                                              tAAAGTGGCGGGGATCACTCCCCTAAGCGCTAACTTAAGGGGTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCCCGATAACTGGt                  >  1:2801160/1‑101 (MQ=14)
                                                                              tAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                  <  1:5769462/101‑1 (MQ=255)
                                                                                aaGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                <  1:3288795/101‑1 (MQ=255)
                                                                                aaGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                >  1:10522209/1‑101 (MQ=255)
                                                                                 aGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg               <  1:10001519/101‑1 (MQ=40)
                                                                                 aGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg               <  1:2955101/101‑1 (MQ=40)
                                                                                  gTGGCGGGGATCCCTCCCATAAGCGCTAACTTAAGGGTTGGGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGc              <  1:180391/101‑1 (MQ=255)
                                                                                     gCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAt           >  1:6352968/1‑101 (MQ=37)
                                                                                      cGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAtt          >  1:5339524/1‑101 (MQ=35)
                                                                                       ggggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTc         <  1:14254357/101‑1 (MQ=35)
                                                                                       ggggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTc         <  1:9239573/101‑1 (MQ=35)
                                                                                        gggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCt        <  1:7492568/101‑1 (MQ=35)
                                                                                        gggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCt        <  1:13143925/101‑1 (MQ=35)
                                                                                        gggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCt        <  1:11369792/101‑1 (MQ=35)
                                                                                         ggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg       <  1:4695521/101‑1 (MQ=35)
                                                                                         ggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg       <  1:12032278/101‑1 (MQ=35)
                                                                                         ggATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg       <  1:14046067/101‑1 (MQ=35)
                                                                                           aTCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc     <  1:8948480/101‑1 (MQ=34)
                                                                                             cACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGccc   <  1:12905117/101‑1 (MQ=32)
                                                                                             cACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGccc   >  1:2005950/1‑101 (MQ=32)
                                                                                             cACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGccc   >  1:652648/1‑101 (MQ=32)
                                                                                              aCTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCa  <  1:2156194/101‑1 (MQ=31)
                                                                                                    |                                                                                              
CCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCA  >  NC_007779/15291‑15485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.