New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 15391 =NA (NA)19 (0.070) 16/172 NT 7.1% intergenic (+93/‑54) dnaJ/insL chaperone Hsp40, co‑chaperone with DnaK/IS186/IS421 transposase
?NC_007779 = 458023 261 (0.960)intergenic (+99/‑89) clpX/lon ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

Only 100 of 372 total aligned reads displayed.

AATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAG  >  NC_007779/457923‑458123
                                                                                                    |                                                                                                    
 atTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATcccc                                                                                                     <  1:13389822/101‑1 (MQ=255)
    aaCCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCata                                                                                                  >  1:2161405/1‑101 (MQ=255)
    aaCCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCCTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCata                                                                                                  >  1:2495988/1‑101 (MQ=255)
     aCCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCatat                                                                                                 >  1:9191135/1‑101 (MQ=255)
       tgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATAc                                                                                               <  1:3174143‑M1/20‑1 (MQ=255)
         ttCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTg                                                                                             >  1:1941932/1‑101 (MQ=255)
          tCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGa                                                                                            >  1:10781291/1‑101 (MQ=255)
          tCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGa                                                                                            >  1:3002714/1‑101 (MQ=255)
          agaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGa                                                                                            >  1:3885103‑M1/79‑101 (MQ=255)
           cccATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGAc                                                                                           <  1:1324071/101‑1 (MQ=255)
           cccATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGAc                                                                                           >  1:10701259/1‑101 (MQ=255)
             cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGt                                                                                         >  1:11006261/1‑101 (MQ=255)
             cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGt                                                                                         <  1:5810239/101‑1 (MQ=255)
             cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGt                                                                                         <  1:7101498/101‑1 (MQ=255)
             cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGt                                                                                         >  1:13462084/1‑101 (MQ=255)
             cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGCAAACATCCCCATATACTGACGt                                                                                         <  1:1150428/101‑1 (MQ=255)
                aCAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACa                                                                                      >  1:13006247/1‑101 (MQ=255)
                 cAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACAt                                                                                     >  1:6969434/1‑101 (MQ=255)
                   aTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGt                                                                                   <  1:9069012/101‑1 (MQ=255)
                      aGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTaa                                                                                >  1:3318266/1‑101 (MQ=255)
                       gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAAt                                                                               <  1:12876159‑M1/36‑1 (MQ=255)
                       gTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgt                                                                               <  1:5232000‑M2/101‑24 (MQ=255)
                       gTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgt                                                                               >  1:7556289‑M2/1‑78 (MQ=255)
                        ttAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATa                                                                              >  1:12633463/1‑101 (MQ=255)
                            ccAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATg                                                                          >  1:4906048/1‑101 (MQ=255)
                              aaaaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGc                                                                        >  1:3831277/1‑101 (MQ=255)
                               aaaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCg                                                                       >  1:6092237/1‑101 (MQ=255)
                                aaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGt                                                                      <  1:13079890/101‑1 (MQ=255)
                                 aaGGGGGGATTTTATCTCTCCTTTAATTTTTCCTCTATTCTCGGCATTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                     <  1:5167480/101‑1 (MQ=255)
                                 aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATTCTGACGTACATGTTAATAGATGGCGTg                                                                     <  1:14231317/101‑1 (MQ=255)
                                 aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                     >  1:13724700/1‑101 (MQ=255)
                                 aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                     >  1:14125232/1‑101 (MQ=255)
                                 aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                     >  1:7668427/1‑101 (MQ=255)
                                   ggggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                   <  1:12517066/101‑1 (MQ=255)
                                     ggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc                                                                 >  1:13677210/1‑101 (MQ=255)
                                      accgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGca                                                                >  1:8041530‑M1/51‑101 (MQ=255)
                                       ggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac                                                               <  1:11275943/101‑1 (MQ=255)
                                       ggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac                                                               >  1:3533256/1‑101 (MQ=255)
                                        gATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatat                                                              >  1:9011172‑M2/1‑61 (MQ=255)
                                        gATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcaca                                                              <  1:12229379/101‑1 (MQ=255)
                                         aTTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAg                                                             >  1:11041563/1‑101 (MQ=255)
                                          ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgac                                                            <  1:1438614‑M1/101‑43 (MQ=255)
                                           tttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTc                                                           >  1:847376/1‑101 (MQ=255)
                                           ggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTc                                                           >  1:13173080‑M1/46‑101 (MQ=255)
                                             tATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgt                                                         >  1:7850914/1‑101 (MQ=255)
                                              aTCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtg                                                        <  1:228330/101‑1 (MQ=255)
                                               tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtgt                                                       <  1:4648441/101‑1 (MQ=255)
                                                 tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa                                                     <  1:11641175/101‑1 (MQ=255)
                                                    ccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCt                                                  <  1:9837859/101‑1 (MQ=255)
                                                     cTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTg                                                 <  1:12371885/101‑1 (MQ=255)
                                                     aggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTg                                                 <  1:6294799‑M1/66‑1 (MQ=255)
                                                      tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa                                                >  1:7465741/1‑101 (MQ=255)
                                                        tAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGAtt                                              >  1:3725171/1‑101 (MQ=255)
                                                            ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCt                                          >  1:2043547/1‑101 (MQ=255)
                                                            ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCt                                          >  1:8691043/1‑101 (MQ=255)
                                                            ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTAAATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCt                                          <  1:278848/101‑1 (MQ=255)
                                                            ntttcCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                          <  1:5097106‑M2/100‑61 (MQ=255)
                                                               tCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGc                                       >  1:7203999/1‑101 (MQ=255)
                                                               tCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGc                                       <  1:10068865/101‑1 (MQ=255)
                                                                ccTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg                                      >  1:4419884/1‑101 (MQ=255)
                                                                 ctctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCgg                                     >  1:2844454/1‑101 (MQ=255)
                                                                  tctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGa                                    <  1:8824867/101‑1 (MQ=255)
                                                                  tctATTCCCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGa                                    >  1:11979409/1‑101 (MQ=255)
                                                                   ctATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaa                                   <  1:6640937/101‑1 (MQ=255)
                                                                    tATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                  <  1:10600493/101‑1 (MQ=255)
                                                                    tATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                  >  1:13900068/1‑101 (MQ=255)
                                                                    tATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                  <  1:1800978/101‑1 (MQ=255)
                                                                     aTTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAt                                 >  1:2629086/1‑101 (MQ=255)
                                                                     aTTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAt                                 <  1:420294/101‑1 (MQ=255)
                                                                       cttaagttagcgcttatGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa                              <  1:4749138‑M1/84‑1 (MQ=255)
                                                                        ctcGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa                              >  1:2066277/1‑101 (MQ=255)
                                                                        ctcGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa                              >  1:3402815/1‑101 (MQ=255)
                                                                        ctcGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaa                              <  1:13832291/101‑1 (MQ=255)
                                                                        ctcGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCCTGAAGCCCCGTCCTGTCATCCGATGGCCTGGCGGAAATTaa                              <  1:9443176/101‑1 (MQ=255)
                                                                         tcGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTaaa                             <  1:1465326/101‑1 (MQ=255)
                                                                          cGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc                            <  1:6434200/101‑1 (MQ=255)
                                                                          cGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc                            <  1:12775146/101‑1 (MQ=255)
                                                                            gCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTa                          <  1:10377629/101‑1 (MQ=255)
                                                                             cGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa                         <  1:374021/101‑1 (MQ=255)
                                                                             cGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa                         >  1:9545223/1‑101 (MQ=255)
                                                                              gTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAag                        <  1:5413994/101‑1 (MQ=255)
                                                                                 gAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagaga                     <  1:12716426/101‑1 (MQ=255)
                                                                                 cgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagaga                     <  1:12001819‑M1/94‑1 (MQ=255)
                                                                                   cttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagagaga                   >  1:1632771‑M1/6‑101 (MQ=255)
                                                                                      tgGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGct                <  1:5679915/101‑1 (MQ=255)
                                                                                       tGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctc               >  1:8400104‑M1/2‑101 (MQ=255)
                                                                                       gggggAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctc               <  1:1742044/101‑1 (MQ=255)
                                                                                         catgtaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTa             >  1:11165067/6‑101 (MQ=255)
                                                                                         GGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTa             >  1:9734572‑M1/1‑101 (MQ=255)
                                                                                          GGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTAt            >  1:2766038‑M1/1‑101 (MQ=255)
                                                                                            aaaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGa          <  1:6815498/101‑1 (MQ=255)
                                                                                             aaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGaa         <  1:832565/101‑1 (MQ=255)
                                                                                             aaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGaa         <  1:11402913/101‑1 (MQ=255)
                                                                                             aaCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGaa         <  1:4482488/101‑1 (MQ=255)
                                                                                                aTCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtagg      <  1:4130133‑M1/101‑97 (MQ=255)
                                                                                                aTCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtagg      <  1:10267404‑M1/101‑97 (MQ=255)
                                                                                                 tCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggc     <  1:7778720‑M1/101‑98 (MQ=255)
                                                                                                 tCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggc     <  1:12806282‑M1/101‑98 (MQ=255)
                                                                                                 tCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgctcttcaattgcgttttgtaggc     <  1:10515458‑M1/101‑98 (MQ=255)
                                                                                                   cccATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa   <  1:5986095/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
AATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAG  >  NC_007779/457923‑458123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.