BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 274373	NA (NA)	32 (0.130)	26/180	NT	9.4%	intergenic (‑32/‑176)	insH/mmuP	IS5 transposase and trans‑activator/S‑methylmethionine transporter
*	?	NC_007779	678446 =	309 (1.290)	32 (0.130)	26/180	NT	9.4%	coding (610/1428 nt)	djlB	chaperone

Only 100 of 382 total aligned reads displayed.

CATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCT  >  NC_007779/678346‑678546

 aTTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTAttt                                                                                                     >  1:3908504/1‑101 (MQ=255)

 aTTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTAttt                                                                                                     <  1:10622388/101‑1 (MQ=255)

  ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTa                                                                                                    >  1:11665396/1‑101 (MQ=255)

  ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTa                                                                                                    <  1:2883453/101‑1 (MQ=255)

  ttCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTa                                                                                                    <  1:5316103/101‑1 (MQ=255)

   tCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAg                                                                                                   >  1:6060128/1‑101 (MQ=255)

   tCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAg                                                                                                   >  1:6652607/1‑101 (MQ=255)

       cATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCa                                                                                               <  1:5625527/101‑1 (MQ=255)

       cATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCa                                                                                               <  1:3491608/101‑1 (MQ=255)

        aTCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCaa                                                                                              <  1:1886069/101‑1 (MQ=255)

        aTCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCaa                                                                                              <  1:8969250/101‑1 (MQ=255)

         tCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAAc                                                                                             <  1:5238980/101‑1 (MQ=255)

         tCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAAc                                                                                             >  1:5442216/1‑101 (MQ=255)

         tCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCAACCACAATGGCTGACATTGTATTTAGCGCAAc                                                                                             <  1:8109557/101‑1 (MQ=255)

          cTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACa                                                                                            >  1:4735122/1‑101 (MQ=255)

           tGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACAt                                                                                           <  1:3085710/101‑1 (MQ=255)

           tGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACAt                                                                                           <  1:7847461/101‑1 (MQ=255)

             cccGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcg                                                                                         <  1:3244746/101‑1 (MQ=255)

               cGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcgcg                                                                                       >  1:5483273/1‑101 (MQ=255)

               cGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcgcg                                                                                       >  1:12040292/1‑101 (MQ=255)

               cGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATcgcg                                                                                       >  1:6359621/1‑101 (MQ=255)

                 ttGCCGTGCAAAATGACACCATCGATATTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCa                                                                                     <  1:10522758/101‑1 (MQ=255)

                 aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCa                                                                                     >  1:10980004‑M2/84‑101 (MQ=255)

                  tGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAg                                                                                    <  1:1719260/101‑1 (MQ=255)

                   gCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGt                                                                                   >  1:5744842/1‑101 (MQ=255)

                   gCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGt                                                                                   <  1:11271149/101‑1 (MQ=255)

                   gCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGt                                                                                   >  1:7176977/1‑101 (MQ=255)

                    ccGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTg                                                                                  <  1:10922487/101‑1 (MQ=255)

                     cGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGa                                                                                 <  1:3443266/101‑1 (MQ=255)

                     cGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGa                                                                                 <  1:4236891/101‑1 (MQ=255)

                       tGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGAtt                                                                               <  1:694193/101‑1 (MQ=255)

                        gCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTa                                                                              >  1:9384960/1‑101 (MQ=255)

                          actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATc                                                                            <  1:1386410‑M2/27‑1 (MQ=255)

                          aaaaTGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATc                                                                            >  1:8703447/1‑101 (MQ=255)

                           aaaTGACACCATCGATTTTTACCAAATTTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTTACATTGTATTTAGCGCAACATCGCGCAGTGATTATcc                                                                           <  1:2743273/101‑1 (MQ=255)

                             aTGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATcccc                                                                         <  1:3613785/101‑1 (MQ=255)

                             aTGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATcccc                                                                         <  1:10204735/101‑1 (MQ=255)

                             aTGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTAACATTGTATTTAGCGCAACATCGCGCAGTGATTATcccc                                                                         <  1:8597292/101‑1 (MQ=255)

                               gACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCga                                                                       >  1:2676574/1‑101 (MQ=255)

                                acacCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCgat                                                                      <  1:11334547/101‑1 (MQ=255)

                                  acCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCgatga                                                                    >  1:11568195/1‑101 (MQ=255)

                                   ccATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCgatgat                                                                   <  1:7573078/101‑1 (MQ=255)

                                    cATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGatgatg                                                                  >  1:4027363/1‑101 (MQ=255)

                                    cATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGatgatg                                                                  >  1:4939467/1‑101 (MQ=255)

                                     aTCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGc                                                                 >  1:591940/1‑101 (MQ=255)

                                           ttttACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACt                                                           >  1:4996923/1‑101 (MQ=255)

                                           ttttACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACt                                                           <  1:4660352/101‑1 (MQ=255)

                                             ttACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGc                                                         >  1:3721499/1‑101 (MQ=255)

                                              tACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGca                                                        >  1:4353779/1‑101 (MQ=255)

                                              tACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGca                                                        >  1:4133350/1‑101 (MQ=255)

                                               atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGcac                                                       >  1:8015127‑M2/54‑101 (MQ=255)

                                               atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGcac                                                       >  1:6745405‑M2/54‑101 (MQ=255)

                                               aCCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGcac                                                       >  1:4464563/1‑101 (MQ=255)

                                               aCCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGcac                                                       >  1:951445/1‑101 (MQ=255)

                                                ccAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGcaca                                                      <  1:8535405/101‑1 (MQ=255)

                                                  aaaTGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGa                                                    >  1:2143548/1‑101 (MQ=255)

                                                  aaaTGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGa                                                    >  1:1511975/1‑101 (MQ=255)

                                                   aaTGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGaa                                                   <  1:10005629/101‑1 (MQ=255)

                                                    tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGaaa                                                  <  1:1307215‑M2/53‑1 (MQ=255)

                                                    aTGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGaaa                                                  >  1:8772866/1‑101 (MQ=255)

                                                    aTGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGaaa                                                  <  1:2384672/101‑1 (MQ=255)

                                                       ttCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAAttt                                               <  1:8171908/101‑1 (MQ=255)

                                                       ttCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAAttt                                               <  1:9564787/101‑1 (MQ=255)

                                                         cGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTAc                                             <  1:625408/101‑1 (MQ=255)

                                                            acaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTcc                                          <  1:4497962‑M2/61‑1 (MQ=255)

                                                             cGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCg                                         <  1:9418040/101‑1 (MQ=255)

                                                              ggATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc                                        >  1:6684404/1‑101 (MQ=255)

                                                              ggATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGc                                        >  1:8822238/1‑101 (MQ=255)

                                                               gATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCt                                       <  1:11462911/101‑1 (MQ=255)

                                                                aTTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTg                                      <  1:10754696/101‑1 (MQ=255)

                                                                   tGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGta                                   >  1:6501801/1‑101 (MQ=255)

                                                                    ggTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGtat                                  <  1:8300642/101‑1 (MQ=255)

                                                                     atctcatatcagggacctgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGtata                                 >  1:5142616‑M2/32‑101 (MQ=255)

                                                                      tctcatatcagggacttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAg                                >  1:11807222‑M2/31‑101 (MQ=255)

                                                                      tCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAg                                <  1:10853042/101‑1 (MQ=255)

                                                                        aTCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAgcg                              <  1:7375194/101‑1 (MQ=255)

                                                                         tCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAgcgc                             >  1:10080651/1‑101 (MQ=255)

                                                                         tCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAgcgc                             <  1:2514051/101‑1 (MQ=255)

                                                                          cGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCa                            >  1:6556162/1‑101 (MQ=255)

                                                                               ccACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCg                       <  1:7675/101‑1 (MQ=255)

                                                                               ccACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCg                       >  1:6152194/1‑101 (MQ=255)

                                                                                    cttgttcgcaccttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTgg                  >  1:10324227‑M2/17‑101 (MQ=255)

                                                                                    aTGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTgg                  <  1:9674768/101‑1 (MQ=255)

                                                                                     tGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGa                 <  1:3858886/101‑1 (MQ=255)

                                                                                     tGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGa                 <  1:6814597/101‑1 (MQ=255)

                                                                                       gCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGata               <  1:9090205/101‑1 (MQ=255)

                                                                                       gCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGata               <  1:12145490/101‑1 (MQ=255)

                                                                                        cTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGatat              <  1:8063099/101‑1 (MQ=255)

                                                                                        cTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGatat              <  1:4838341/101‑1 (MQ=255)

                                                                                         tGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATc             >  1:4311208/1‑101 (MQ=255)

                                                                                         tGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATc             <  1:2459394/101‑1 (MQ=255)

                                                                                         tGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATc             <  1:2059534/101‑1 (MQ=255)

                                                                                          gACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATcc            >  1:8431902/1‑101 (MQ=255)

                                                                                             accttccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCg         >  1:11150988‑M2/8‑101 (MQ=255)

                                                                                             aTTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCg         >  1:710578/1‑101 (MQ=255)

                                                                                               tGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGaa       >  1:7360516/1‑101 (MQ=255)

                                                                                               tGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGaa       >  1:11720641/1‑101 (MQ=255)

                                                                                                 tccTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACt     <  1:9208044‑M2/98‑1 (MQ=255)

                                                                                                  aTTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACtt    <  1:9261690/101‑1 (MQ=255)

                                                                                                   tttAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTc   >  1:9885371/1‑101 (MQ=255)

CATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCT  >  NC_007779/678346‑678546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.