BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	49661 =	277 (1.010)	37 (0.140)	34/180	NT	11.8%	intergenic (+30/‑162)	kefC/folA	potassium:proton antiporter/dihydrofolate reductase
*	?	NC_007779	273179 =	NA (NA)	37 (0.140)	34/180	NT	11.8%	coding (1109/1146 nt)	ykfC	hypothetical protein

Only 100 of 367 total aligned reads displayed.

GGCAGGGAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACC  >  NC_007779/49561‑49761

ggcAGGGAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGc                                                                                                      <  1:5954418/101‑1 (MQ=255)

   aGGGAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTaa                                                                                                   >  1:9193129/1‑101 (MQ=255)

    gggAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAAc                                                                                                  >  1:810507/1‑101 (MQ=255)

     tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACt                                                                                                 <  1:9496586‑M1/6‑1 (MQ=255)

        aCCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACtgtt                                                                                              >  1:8371516/1‑101 (MQ=255)

         ccGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACtgttt                                                                                             >  1:1097475/1‑101 (MQ=255)

          cGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACtgtttg                                                                                            >  1:7949969/1‑101 (MQ=255)

          cGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACtgtttg                                                                                            >  1:13521115/1‑101 (MQ=255)

            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACtgtttgtt                                                                                          <  1:7586526‑M1/13‑1 (MQ=255)

            aagaagGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAAggaaggtgc                                                                                          >  1:1494491‑M1/1‑92 (MQ=255)

            aagaagGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACtgtttgtt                                                                                          >  1:9642319/1‑101 (MQ=255)

             agaagGTAAACATACCGGCAACATGGCGGATGAACCGGAAACCAAACCCTCATCCTAATAAAGAGCGACGTAAATAACACTTTACAGCTAACTgtttgttt                                                                                         >  1:8144262/1‑101 (MQ=255)

              ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGtttgtttt                                                                                        >  1:5588561‑M1/87‑101 (MQ=255)

               aagGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGtttgttttt                                                                                       <  1:12611206/101‑1 (MQ=255)

                 ggTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGtttgtttttgt                                                                                     <  1:1684779/101‑1 (MQ=255)

                  gTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGtttgtttttgtt                                                                                    <  1:4678036/101‑1 (MQ=255)

                   tAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTttgtttttgttt                                                                                   <  1:12032810/101‑1 (MQ=255)

                    aaaCATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTc                                                                                  >  1:3014156/1‑101 (MQ=255)

                     aaCATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCa                                                                                 >  1:372970/1‑101 (MQ=255)

                       cATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCAtt                                                                               >  1:4286183/1‑101 (MQ=255)

                        aTACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAAggaaggtgcgaacaagtccct                                                                              <  1:9928772‑M1/101‑22 (MQ=255)

                        aTACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTg                                                                              >  1:12239008/1‑101 (MQ=255)

                        aTACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTg                                                                              >  1:3203825/1‑101 (MQ=255)

                         tACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGt                                                                             >  1:13708931/1‑101 (MQ=255)

                          aCCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTa                                                                            >  1:6107774/1‑101 (MQ=255)

                           ccGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTaa                                                                           >  1:5349200/1‑101 (MQ=255)

                           ccGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTaa                                                                           <  1:7179951/101‑1 (MQ=255)

                            cGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAAt                                                                          <  1:7753603/101‑1 (MQ=255)

                            cGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAAt                                                                          <  1:7689112/101‑1 (MQ=255)

                            cGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAAt                                                                          <  1:11974950/101‑1 (MQ=255)

                            cGGCAACATGGCGGATGAACCGGAAACGAAACCCTCACCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAAt                                                                          >  1:10204110/1‑101 (MQ=255)

                             ggCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATg                                                                         <  1:11023167/101‑1 (MQ=255)

                              gCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgc                                                                        >  1:2850421/1‑101 (MQ=255)

                               cAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAA‑AGTGACGTAAATCACACTTTAACGCTAACTGTTTGTTTTTGTTTCCTTGTAATgcgg                                                                      >  1:11327581/1‑101 (MQ=255)

                                aaCATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcgg                                                                      <  1:3802156/101‑1 (MQ=255)

                                aaCATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcgg                                                                      <  1:123818/101‑1 (MQ=255)

                                 ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGTTTGTTTTTGTTTCATTGTAATgcggc                                                                     <  1:1421597‑M1/34‑1 (MQ=255)

                                 aCATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAAggaaggtgcgaacaagtccctgatatgaga                                                                     >  1:11603958‑M1/1‑71 (MQ=255)

                                 aCATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcggc                                                                     >  1:6373774/1‑101 (MQ=255)

                                 aCATGGCGGAGGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcggc                                                                     >  1:11825519/1‑101 (MQ=255)

                                  tcaaacaagaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGTTTGTTTTTGTTTCATTGTAATgcggcg                                                                    >  1:1574738‑M1/67‑101 (MQ=255)

                                   aTGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGa                                                                   <  1:2109790/101‑1 (MQ=255)

                                   aTGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGa                                                                   >  1:736227/1‑101 (MQ=255)

                                     ggCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGt                                                                 >  1:4320605/1‑101 (MQ=255)

                                     ggCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGt                                                                 >  1:4206213/1‑101 (MQ=255)

                                      gCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTc                                                                >  1:2384844/1‑101 (MQ=255)

                                         gATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAg                                                             <  1:8207190/101‑1 (MQ=255)

                                          aTGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAgg                                                            <  1:6299539/101‑1 (MQ=255)

                                            gAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGga                                                          <  1:5639820/101‑1 (MQ=255)

                                                  gaaacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGc                                                    <  1:5735916/101‑1 (MQ=255)

                                                  gaaacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGc                                                    <  1:6656239/101‑1 (MQ=255)

                                                  gaaacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGc                                                    >  1:7463799/1‑101 (MQ=255)

                                                  gaaacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGc                                                    <  1:3964937/101‑1 (MQ=255)

                                                    aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGt                                                  >  1:5271634‑M1/49‑101 (MQ=255)

                                                    aacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGt                                                  <  1:8899272/101‑1 (MQ=255)

                                                    aacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGt                                                  >  1:8708090/1‑101 (MQ=255)

                                                        aaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGAc                                              >  1:9316689/1‑101 (MQ=255)

                                                         aacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                             <  1:6537835‑M1/101‑55 (MQ=255)

                                                         aacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACt                                             >  1:8046801/1‑101 (MQ=255)

                                                           cccTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                           <  1:8551425‑M1/101‑57 (MQ=255)

                                                             cTCATCCTAAAAAAGGGTGACTTAAATCCCACTTTACAGCTAACTGTTTGTTTTTTTTTCTTTGTAATGCGGGGAGTCCAGGGAGAGAGCGTGGACTCGcc                                         <  1:9773507/101‑1 (MQ=255)

                                                                aTCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagc                                      >  1:11181214/1‑101 (MQ=255)

                                                                 tCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagca                                     <  1:2565607/101‑1 (MQ=255)

                                                                  ccTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagcag                                    >  1:4812889/1‑101 (MQ=255)

                                                                  ccTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagcag                                    <  1:5492462/101‑1 (MQ=255)

                                                                    taataaAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGaa                                  >  1:9134548/1‑101 (MQ=255)

                                                                      ataaAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAata                                >  1:10043804/1‑101 (MQ=255)

                                                                      ataaAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAata                                >  1:2757273/1‑101 (MQ=255)

                                                                      ataaAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAata                                >  1:2535047/1‑101 (MQ=255)

                                                                        aaaGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAAtata                              >  1:2283066/1‑101 (MQ=255)

                                                                         aaGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATaa                             <  1:11269906/101‑1 (MQ=255)

                                                                          agagTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATaaa                            >  1:10375328/1‑101 (MQ=255)

                                                                          agagTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATaaa                            <  1:7915375/101‑1 (MQ=255)

                                                                             gTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAAtt                         <  1:4604494/101‑1 (MQ=255)

                                                                               gACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAAtttt                       <  1:10642507/101‑1 (MQ=255)

                                                                               gACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAAtttt                       <  1:13784227/101‑1 (MQ=255)

                                                                               gACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATACAAAAtttt                       <  1:6876935/101‑1 (MQ=255)

                                                                                aCGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTc                      <  1:6975349/101‑1 (MQ=255)

                                                                                 cGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTcc                     >  1:6700280/1‑101 (MQ=255)

                                                                                  gTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCTCCAGCAGAATATAAAATTTTCCt                    <  1:3333104/101‑1 (MQ=255)

                                                                                  gTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCt                    <  1:9562078/101‑1 (MQ=255)

                                                                                  gTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCt                    >  1:1368574/1‑101 (MQ=255)

                                                                                   tAAATCACACTTTACAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                   >  1:12438772‑M1/1‑21 (MQ=255)

                                                                                   tAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTc                   <  1:13325934/101‑1 (MQ=255)

                                                                                    cttattcgcaccttccCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCa                  >  1:13292703‑M1/17‑101 (MQ=255)

                                                                                    aaaTCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCa                  <  1:9012494/101‑1 (MQ=255)

                                                                                    aaaTCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCa                  <  1:10451364/101‑1 (MQ=255)

                                                                                     aaTCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCaa                 <  1:11743160/101‑1 (MQ=255)

                                                                                     aaTCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCaa                 >  1:2047807/1‑101 (MQ=255)

                                                                                       tCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAca               <  1:3872317/101‑1 (MQ=255)

                                                                                          cacTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAcatca            >  1:13243617/1‑101 (MQ=255)

                                                                                            caccttccCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACatcatc          >  1:12275442‑M1/9‑101 (MQ=255)

                                                                                              ccttccCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCt        >  1:10512808‑M1/7‑101 (MQ=255)

                                                                                               tACAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc       <  1:7058949‑M1/101‑93 (MQ=255)

                                                                                                 cAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGc     <  1:1290754/101‑1 (MQ=255)

                                                                                                  ccCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGCCCAGGGAGAAAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCa    <  1:6197658‑M1/99‑1 (MQ=255)

                                                                                                  aGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac    <  1:2704367‑M1/101‑96 (MQ=255)

                                                                                                  aGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCa    <  1:12740513/101‑1 (MQ=255)

                                                                                                   gCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCAc   <  1:5036587/101‑1 (MQ=255)

                                                                                                    cTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCAcc  >  1:1903674/1‑101 (MQ=255)

GGCAGGGAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACC  >  NC_007779/49561‑49761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.