| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 3746911 = | NA (NA) | 257 (1.100) | 120/180 | NT | 99.6% | intergenic (‑509/‑68) | mdtL/insH | multidrug efflux system protein/IS5 element protein |
| ? | NC_007779 | = 3748646 | 1 (0.000) | intergenic (+687/+425) | insH/tnaA | IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
Only 100 of 581 total aligned reads displayed.
CGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAATC > NC_007779/3748546‑3748746 | ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 1:9553013‑M2/97‑101 (MQ=255) gAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAg < 1:9321234‑M2/101‑2 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATg < 1:2394484‑M2/6‑1 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGa < 1:9364876‑M2/7‑1 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATc < 1:4870146‑M2/9‑1 (MQ=255) tAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaagg > 1:2547448‑M2/1‑95 (MQ=255) tAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaagg < 1:2912077‑M2/101‑7 (MQ=255) aaCCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggt > 1:6591458‑M2/1‑94 (MQ=255) ccACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgc < 1:9814469‑M2/101‑10 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCAcc < 1:7393318‑M2/14‑1 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCAt < 1:10713086‑M2/16‑1 (MQ=255) caATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaa > 1:10313861‑M2/1‑89 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTa < 1:3094616‑M2/18‑1 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCa < 1:10902921‑M2/21‑1 (MQ=255) cGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagt < 1:1566429‑M2/101‑18 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCag > 1:8695186‑M2/80‑101 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCaga < 1:11867491‑M2/23‑1 (MQ=255) cTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtcc > 1:5808353‑M2/1‑82 (MQ=255) tGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccc < 1:7120228‑M2/101‑21 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCagag < 1:10595232‑M2/24‑1 (MQ=255) gCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctg > 1:8205790‑M2/1‑79 (MQ=255) gCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctg > 1:4103446‑M2/1‑79 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGatat > 1:2031808‑M2/74‑101 (MQ=255) aaCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAACTTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgat > 1:9194840‑M2/1‑77 (MQ=255) aaCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGTTATCGTTTCACTAAggaaggtgcgaacaagtccctgat < 1:4196516‑M2/101‑25 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAg < 1:4504458‑M2/30‑1 (MQ=255) cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAgg < 1:6987991‑M2/31‑1 (MQ=255) aaaaTGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatga > 1:8910936‑M2/1‑73 (MQ=255) aaTGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgaga > 1:8340432‑M2/1‑71 (MQ=255) tGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatc < 1:5308486‑M2/101‑33 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATaa < 1:1129251‑M2/36‑1 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAg > 1:2269453‑M2/65‑101 (MQ=255) gCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcat > 1:6381729‑M2/1‑67 (MQ=255) gCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcat > 1:2443744‑M2/1‑67 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTg < 1:2779496‑M2/39‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGa < 1:10761606‑M2/43‑1 (MQ=255) cAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt < 1:11380022‑M2/101‑41 (MQ=255) gATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca > 1:6906166‑M2/1‑59 (MQ=255) aTCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 1:3043602‑M2/1‑58 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATag < 1:3491965‑M2/48‑1 (MQ=255) cccGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:8971730‑M2/1‑56 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATaga < 1:7474349‑M2/49‑1 (MQ=255) ccGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 1:8499479‑M2/101‑47 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAgaga < 1:4691649‑M2/51‑1 (MQ=255) gACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga > 1:11746750‑M2/1‑53 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGaa < 1:11228543‑M2/52‑1 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGTTCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAAc < 1:9247401‑M2/53‑1 (MQ=255) cAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc < 1:8560461‑M2/101‑51 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACg > 1:7957715‑M2/48‑101 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACg < 1:5666674‑M2/54‑1 (MQ=255) aTACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca > 1:7603225‑M2/1‑49 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAg < 1:10453462‑M2/57‑1 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAgg > 1:7885199‑M2/44‑101 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGc < 1:1240824‑M2/59‑1 (MQ=255) cGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:11637224‑M2/1‑46 (MQ=255) gagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCa < 1:11120609‑M2/60‑1 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAAc < 1:5536450‑M2/62‑1 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACg > 1:8104220‑M2/39‑101 (MQ=255) gATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:1878721‑M2/1‑42 (MQ=255) gATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:7305447‑M2/1‑42 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGt < 1:2138575‑M2/65‑1 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGCGAGGATATAGAGAACGAAGGCAACGGt > 1:10001316‑M2/37‑101 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTa > 1:9679548‑M2/36‑101 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGACGATATAGAGAACGAAGGCAACGGTaa < 1:7707781‑M2/67‑1 (MQ=255) tgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAAt > 1:6213583‑M2/34‑101 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAAt > 1:3928197‑M2/34‑101 (MQ=255) gTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:11502718‑M2/101‑67 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATAc < 1:5450785‑M2/70‑1 (MQ=255) gaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATAcc < 1:2653156‑M2/71‑1 (MQ=255) agaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGc > 1:6455586‑M2/29‑101 (MQ=255) agaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGc < 1:6846751‑M2/73‑1 (MQ=255) aTAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 1:6053897‑M2/1‑32 (MQ=255) tAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:9733010‑M2/1‑31 (MQ=255) gaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCt < 1:4325532‑M2/74‑1 (MQ=255) aTTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 1:3780217‑M2/101‑79 (MQ=255) tCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:5110599‑M2/1‑21 (MQ=255) cATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 1:3298612‑M2/101‑82 (MQ=255) ttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCa > 1:6156348‑M2/16‑101 (MQ=255) tGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta > 1:10189335‑M2/1‑17 (MQ=255) atatCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 1:6725244‑M2/101‑87 (MQ=255) atatCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 1:1740694‑M2/101‑87 (MQ=255) tcgaaatcactaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 1:1470642‑M2/7‑13 (MQ=255) tcgaaatcactaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 1:3446439‑M2/7‑13 (MQ=255) gcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGtt > 1:9047298‑M2/10‑101 (MQ=255) caccttccCTAATGATCGCAACATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTa < 1:3693684‑M2/93‑1 (MQ=255) gTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 1:10128842‑M2/1‑10 (MQ=255) gTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 1:10231213‑M2/1‑10 (MQ=255) tttCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 1:3583643‑M2/1‑9 (MQ=255) ttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGa > 1:1975165‑M2/5‑101 (MQ=255) tCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga < 1:3170698‑M2/101‑95 (MQ=255) ccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGAtt > 1:221557‑M2/3‑101 (MQ=255) cACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:1330470‑M2/101‑96 (MQ=255) cACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 1:1101262‑M2/1‑6 (MQ=255) cACTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataaaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:8619558‑M2/101‑96 (MQ=255) cCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTa > 1:6277540‑M2/2‑101 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:4802443‑M2/1‑5 (MQ=255) cTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGAGATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTaa < 1:7834056/101‑1 (MQ=255) tAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTaaa > 1:5006976/1‑101 (MQ=255) aTGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAATc > 1:10512555/1‑101 (MQ=255) aTGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAATc > 1:5935817/1‑101 (MQ=255) | CGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAATC > NC_007779/3748546‑3748746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |