BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 2412225	NA (NA)	33 (0.130)	29/180	NT	12.0%	intergenic (‑55/‑782)	insA/yfbQ	IS1 element protein/aminotransferase
*	?	NC_007779	2941338 =	243 (0.940)	33 (0.130)	29/180	NT	12.0%	intergenic (‑115/+236)	gcvA/ygdI	DNA‑binding transcriptional dual regulator/hypothetical protein

Only 100 of 339 total aligned reads displayed.

GATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTT  >  NC_007779/2941238‑2941438

  tGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCt                                                                                                    <  1:7551057/101‑1 (MQ=255)

   gTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCta                                                                                                   >  1:341183/1‑101 (MQ=255)

    ttAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCtat                                                                                                  >  1:6601520/1‑101 (MQ=255)

     tAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCtata                                                                                                 >  1:5044433/1‑101 (MQ=255)

     tAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCtata                                                                                                 <  1:8997888/101‑1 (MQ=255)

      aaaTGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAg                                                                                                >  1:4023868/1‑101 (MQ=255)

       aaTGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGt                                                                                               >  1:8526718/1‑101 (MQ=255)

        aTGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTg                                                                                              >  1:11912863/1‑101 (MQ=255)

        aTGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTg                                                                                              >  1:610023/1‑101 (MQ=255)

         tGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGG                                                                                             >  1:5841860‑M2/1‑101 (MQ=255)

         tGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGG                                                                                             <  1:12363804‑M2/101‑1 (MQ=255)

           aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcg                                                                                           <  1:10875694/101‑1 (MQ=255)

             tttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcggc                                                                                         <  1:10612877/101‑1 (MQ=255)

             tttAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTggcggc                                                                                         <  1:10682194/101‑1 (MQ=255)

                 aCAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgac                                                                                     <  1:12717984‑M2/101‑9 (MQ=255)

                  cAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTc                                                                                    >  1:9496761/1‑101 (MQ=255)

                   aaTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactc                                                                                   >  1:6751863‑M2/1‑91 (MQ=255)

                   aaTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTcc                                                                                   <  1:5731698/101‑1 (MQ=255)

                   aaTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTcc                                                                                   >  1:1073533/1‑101 (MQ=255)

                    aTTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCt                                                                                  >  1:1377336/1‑101 (MQ=255)

                     ttAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTg                                                                                 >  1:9605983/1‑101 (MQ=255)

                      tAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGa                                                                                >  1:9740881/1‑101 (MQ=255)

                      cagctgatagaaacagaagccactggggcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGa                                                                                <  1:1586729‑M2/23‑1 (MQ=255)

                      cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGa                                                                                >  1:3662912‑M2/79‑101 (MQ=255)

                       aGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAg                                                                               <  1:13103129/101‑1 (MQ=255)

                       aGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAg                                                                               <  1:7779557/101‑1 (MQ=255)

                        gATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGc                                                                              <  1:8679991/101‑1 (MQ=255)

                          tCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaactta                                                                            <  1:7860551‑M2/101‑18 (MQ=255)

                          tCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCg                                                                            <  1:9075378/101‑1 (MQ=255)

                           cacaCTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCgg                                                                           <  1:5180374/101‑1 (MQ=255)

                           cacaCTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCgg                                                                           >  1:1748979/1‑101 (MQ=255)

                           cacaCTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCgg                                                                           <  1:1115363/101‑1 (MQ=255)

                            acacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttatt                                                                          >  1:3016692‑M2/1‑82 (MQ=255)

                             tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGaa                                                                         >  1:13212185‑M2/72‑101 (MQ=255)

                             cacTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGaa                                                                         <  1:5584127/101‑1 (MQ=255)

                               cTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgat                                                                       >  1:9881046‑M2/1‑79 (MQ=255)

                               cTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACg                                                                       <  1:4289401/101‑1 (MQ=255)

                               cTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACg                                                                       <  1:6530588/101‑1 (MQ=255)

                                tATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGa                                                                      <  1:8452790/101‑1 (MQ=255)

                                 aTGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGaa                                                                     <  1:10485162/101‑1 (MQ=255)

                                    tAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAg                                                                  >  1:13330952/1‑101 (MQ=255)

                                     taCCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGt                                                                 <  1:7003212/100‑1 (MQ=255)

                                       ccTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGttt                                                               <  1:3188834/101‑1 (MQ=255)

                                        gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGtttt                                                              >  1:12239010‑M2/61‑101 (MQ=255)

                                         tATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTa                                                             >  1:7118429/1‑101 (MQ=255)

                                           ttAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgt                                                           >  1:7886343‑M2/1‑67 (MQ=255)

                                           ttAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCTCTTCCTGAGCCGGAACGAAAAGTTTTATc                                                           <  1:993906/101‑1 (MQ=255)

                                           ttAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATc                                                           >  1:1427150/1‑101 (MQ=255)

                                           actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATc                                                           <  1:5795989‑M2/44‑1 (MQ=255)

                                            tAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCg                                                          <  1:10337618/101‑1 (MQ=255)

                                            tAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCg                                                          >  1:2139652/1‑101 (MQ=255)

                                             aGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCgg                                                         >  1:6554524/1‑101 (MQ=255)

                                              gTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGa                                                        >  1:11235763/1‑101 (MQ=255)

                                               tttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGaa                                                       <  1:1675432/101‑1 (MQ=255)

                                               tttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGaa                                                       >  1:546212/1‑101 (MQ=255)

                                                ttttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAAt                                                      <  1:6675747/101‑1 (MQ=255)

                                                 tttttAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagat                                                     >  1:7377826‑M2/1‑61 (MQ=255)

                                                     tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtg                                                 <  1:8200019/101‑1 (MQ=255)

                                                     tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCgtg                                                 <  1:4277029/101‑1 (MQ=255)

                                                        tCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTc                                              >  1:5279641/1‑101 (MQ=255)

                                                        tCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTc                                              >  1:5667683/1‑101 (MQ=255)

                                                         cTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTTGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCt                                             <  1:11955518/101‑1 (MQ=255)

                                                             gCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTg                                         >  1:9215621/1‑101 (MQ=255)

                                                               cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                       <  1:10143516/101‑1 (MQ=255)

                                                               cATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGaa                                       >  1:4075309/1‑101 (MQ=255)

                                                                 ttATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACt                                     <  1:1874584/101‑1 (MQ=255)

                                                                  tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                    >  1:5068866‑M2/1‑44 (MQ=255)

                                                                  tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtt                                    <  1:375381/101‑1 (MQ=255)

                                                                   ataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACttt                                   >  1:2596818/1‑101 (MQ=255)

                                                                   ataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACttt                                   <  1:3779693/101‑1 (MQ=255)

                                                                    taAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtttt                                  <  1:8898321/101‑1 (MQ=255)

                                                                    taAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACtttt                                  >  1:11761794/1‑101 (MQ=255)

                                                                     aaaTTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTg                                 <  1:11006903/101‑1 (MQ=255)

                                                                      aaTTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTgg                                >  1:11397268/1‑101 (MQ=255)

                                                                          gTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTa                            >  1:8283981/1‑101 (MQ=255)

                                                                            ccGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACg                          >  1:12882604/1‑101 (MQ=255)

                                                                            ccGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACg                          >  1:2415687/1‑101 (MQ=255)

                                                                             cGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACgg                         <  1:2250025/101‑1 (MQ=255)

                                                                              tcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                        >  1:6189142‑M2/23‑101 (MQ=255)

                                                                              tcagtaagttggcagcatcaccCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                        >  1:12603836‑M2/23‑101 (MQ=255)

                                                                              gTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGt                        >  1:2504478/1‑101 (MQ=255)

                                                                               ttGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGtt                       >  1:10240434/1‑101 (MQ=255)

                                                                                 gAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTtgt                     <  1:3913655/101‑1 (MQ=255)

                                                                                 gAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTtgt                     >  1:9675947/1‑101 (MQ=255)

                                                                                  aGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTtgtg                    >  1:7585747/1‑101 (MQ=255)

                                                                                   gCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGa                   >  1:12093644/1‑101 (MQ=255)

                                                                                   gCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGa                   >  1:6391036/1‑101 (MQ=255)

                                                                                   gCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGa                   >  1:7340920/1‑101 (MQ=255)

                                                                                     ttCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtg                 >  1:6026126/1‑101 (MQ=255)

                                                                                        tACCAGCAAATACCTATAGTGGgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg              <  1:2818869‑M2/101‑80 (MQ=255)

                                                                                        tACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttg              <  1:3459750/101‑1 (MQ=255)

                                                                                         aCCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgt             >  1:9345037/1‑101 (MQ=255)

                                                                                         aCCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgt             <  1:7462520/101‑1 (MQ=255)

                                                                                              cAAATACCTATAGTGGCGGCCCTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTTTTCTGGGGAACTTTTGGCTTACGGTTGTGAtgttgtgttgt        <  1:4818085/101‑1 (MQ=255)

                                                                                              cAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgt        <  1:6261359/101‑1 (MQ=255)

                                                                                               aaaTACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgtt       <  1:4747475/101‑1 (MQ=255)

                                                                                                aaTACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttg      <  1:1914961/101‑1 (MQ=255)

                                                                                                aaTACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttg      <  1:6886804/101‑1 (MQ=255)

                                                                                                   aCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttgtgt   >  1:9448800/1‑101 (MQ=255)

                                                                                                   aCCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGAtgttgtgttgttgtgt   >  1:4499670/1‑101 (MQ=255)

GATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTT  >  NC_007779/2941238‑2941438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.