breseq  version 0.25c  
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation freq annotation gene description
RA 13,269 A→G 7.5% E369E (GAA→GAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,271 C→T 7.4% A370V (GCT→GTT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,275 A→C 9.7% V371V (GTA→GTC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,279 A→G 10.1% I373V (ATC→GTC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,281 C→T 9.9% I373I (ATC→ATT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,291 G→C 14.5% V377L (GTT→CTT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,293 T→G 13.9% V377V (GTT→GTG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,298 G→C 14.4% G379A (GGT→GCT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,299 T→C 14.4% G379G (GGT→GGC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,302 T→C 15.0% G380G (GGT→GGC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,309 A→C 14.3% T383P (ACT→CCT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,310 C→G 14.4% T383S (ACT→AGT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,311 T→C 14.5% T383T (ACT→ACC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,317 C→G 15.3% D385E (GAC→GAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,320 A→C 15.5% V386V (GTA→GTC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,323 A→G 15.5% K387K (AAA→AAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,329 A→G 19.5% V389V (GTA→GTG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,338 G→C 21.5% L392L (CTG→CTC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,356 T→G 22.3% S398S (TCT→TCG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,365 C→T 19.0% I401I (ATC→ATT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,368 A→G 18.5% E402E (GAA→GAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,373 T→A 17.0% M404K (ATG→AAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,383 G→C 13.6% V407V (GTG→GTC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,389 G→C 14.1% T409T (ACG→ACC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,391 C→A 14.1% T410K (ACG→AAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,400 C→A 13.3% A413E (GCG→GAG)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,402 A→C 13.0% K414Q (AAA→CAA)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,403 A→G 12.9% K414R (AAA→AGA)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 13,404 A→C 13.0% K414N (AAA→AAC)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 66,457 C→A 100% V32F (GTT→TTT)  araD ← L‑ribulose‑5‑phosphate 4‑epimerase
RA 80,397 T→C 5.6% Q156Q (CAA→CAG)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,403 T→A 5.3% A154A (GCA→GCT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,409 T→A 10.2% V152V (GTA→GTT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,415 T→C 13.8% E150E (GAA→GAG)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,430 G→A 14.2% G145G (GGC→GGT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,447 G→T 14.3% L140M (CTG→ATG)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,448 T→C 14.2% A139A (GCA→GCG)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,454 A→G 14.8% F137F (TTT→TTC)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,457 C→A 15.1% A136A (GCG→GCT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,460 G→A 15.3% G135G (GGC→GGT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,466 G→C 15.4% T133T (ACC→ACG)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,469 G→T 15.5% A132A (GCC→GCA)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,472 G→A 14.3% T131T (ACC→ACT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,475 A→G 14.3% H130H (CAT→CAC)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,484 G→A 11.1% G127G (GGC→GGT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,487 G→A 11.1% C126C (TGC→TGT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,495 T→C 9.2% I124V (ATT→GTT)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,499 C→G 4.5% M122I (ATG→ATC)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,500 A→G 4.6% M122T (ATG→ACG)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 80,502 C→G 5.0% G121G (GGG→GGC)  leuC ← 3‑isopropylmalate isomerase subunit, dehydratase component
RA 97,880 C→T 100% S265F (TCC→TTC)  murD → UDP‑N‑acetylmuramoyl‑L‑alanine:D‑glutamate ligase
RA 109,346 T→A 2.6% A356A (GCT→GCA)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,347 G→A 2.6% V357M (GTG→ATG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,349 G→T 2.6% V357V (GTG→GTT)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,352 A→G 2.6% E358E (GAA→GAG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,355 G→C 2.6% A359A (GCG→GCC)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,358 A→G 2.8% K360K (AAA→AAG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,368 C→G 3.7% Q364E (CAG→GAG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,373 C→T 3.7% I365I (ATC→ATT)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,374 C→A 3.7% Q366K (CAG→AAG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,382 A→G 6.6% E368E (GAA→GAG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,388 A→G 6.7% Q370Q (CAA→CAG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,397 T→A 6.8% A373A (GCT→GCA)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,398 T→A 6.7% S374T (TCG→ACG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,400 G→C 6.8% S374S (TCG→TCC)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,401 A→G 6.8% I375V (ATC→GTC)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,403 C→T 6.7% I375I (ATC→ATT)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,406 C→G 6.5% T376T (ACC→ACG)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,407 T→C 6.5% F377L (TTC→CTC)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,424 T→C 6.7% R382R (CGT→CGC)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 109,442 G→C 5.1% A388A (GCG→GCC)  secA → preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
RA 167,632 C→A 100% P50Q (CCG→CAG)  fhuA → ferrichrome outer membrane transporter
RA 190,413 T→C 6.9% G180G (GGT→GGC)  rpsB → 30S ribosomal protein S2
RA 190,423 T→G 7.3% F184V (TTT→GTT)  rpsB → 30S ribosomal protein S2
RA 190,428 T→C 7.1% A185A (GCT→GCC)  rpsB → 30S ribosomal protein S2
RA 190,432 G→C 7.2% V187L (GTT→CTT)  rpsB → 30S ribosomal protein S2
RA 190,434 T→G 7.4% V187V (GTT→GTG)  rpsB → 30S ribosomal protein S2
RA 190,437 T→C 7.1% D188D (GAT→GAC)  rpsB → 30S ribosomal protein S2
RA 190,445 C→G 7.6% S191C (TCT→TGT)  rpsB → 30S ribosomal protein S2
RA 190,446 T→C 7.6% S191S (TCT→TCC)  rpsB → 30S ribosomal protein S2
RA 190,449 T→C 7.5% D192D (GAT→GAC)  rpsB → 30S ribosomal protein S2
RA 190,455 C→T 8.1% D194D (GAC→GAT)  rpsB → 30S ribosomal protein S2
RA 190,457 G→A 7.9% G195D (GGT→GAT)  rpsB → 30S ribosomal protein S2
RA 190,458 T→C 7.9% G195G (GGT→GGC)  rpsB → 30S ribosomal protein S2
RA 190,464 C→T 7.7% D197D (GAC→GAT)  rpsB → 30S ribosomal protein S2
RA 190,468 G→C 8.1% V199L (GTT→CTT)  rpsB → 30S ribosomal protein S2
RA 190,469 T→C 8.1% V199A (GTT→GCT)  rpsB → 30S ribosomal protein S2
RA 190,470 T→G 8.1% V199V (GTT→GTG)  rpsB → 30S ribosomal protein S2
RA 190,479 T→C 8.5% G202G (GGT→GGC)  rpsB → 30S ribosomal protein S2
RA 190,497 T→C 8.1% R208R (CGT→CGC)  rpsB → 30S ribosomal protein S2
RA 224,686 T→G 50.7% noncoding (916/1542 nt) rrsH → 16S ribosomal RNA
RA 224,713 T→C 27.8% noncoding (943/1542 nt) rrsH → 16S ribosomal RNA
RA 224,725 T→A 22.1% noncoding (955/1542 nt) rrsH → 16S ribosomal RNA
RA 224,759 T→G 16.4% noncoding (989/1542 nt) rrsH → 16S ribosomal RNA
RA 224,768 C→A 15.3% noncoding (998/1542 nt) rrsH → 16S ribosomal RNA
RA 224,769 C→T 15.4% noncoding (999/1542 nt) rrsH → 16S ribosomal RNA
RA 224,779 T→G 1.8% noncoding (1009/1542 nt) rrsH → 16S ribosomal RNA
RA 224,790 Δ1 bp 1.7% noncoding (1020/1542 nt) rrsH → 16S ribosomal RNA
RA 224,791 Δ1 bp 1.7% noncoding (1021/1542 nt) rrsH → 16S ribosomal RNA
RA 224,796 G→T 1.8% noncoding (1026/1542 nt) rrsH → 16S ribosomal RNA
RA 224,805 A→G 2.1% noncoding (1035/1542 nt) rrsH → 16S ribosomal RNA
RA 224,806 A→C 1.7% noncoding (1036/1542 nt) rrsH → 16S ribosomal RNA
RA 224,811 Δ1 bp 1.8% noncoding (1041/1542 nt) rrsH → 16S ribosomal RNA
RA 224,887 A→G 29.0% noncoding (1117/1542 nt) rrsH → 16S ribosomal RNA
RA 224,892 T→A 30.2% noncoding (1122/1542 nt) rrsH → 16S ribosomal RNA
RA 224,902 +A 29.8% noncoding (1132/1542 nt) rrsH → 16S ribosomal RNA
RA 224,903 G→C 30.0% noncoding (1133/1542 nt) rrsH → 16S ribosomal RNA
RA 224,906 C→T 34.2% noncoding (1136/1542 nt) rrsH → 16S ribosomal RNA
RA 224,907 C→G 34.3% noncoding (1137/1542 nt) rrsH → 16S ribosomal RNA
RA 224,908 G→T 34.1% noncoding (1138/1542 nt) rrsH → 16S ribosomal RNA
RA 224,910 C→G 34.3% noncoding (1140/1542 nt) rrsH → 16S ribosomal RNA
RA 224,911 C→T 34.2% noncoding (1141/1542 nt) rrsH → 16S ribosomal RNA
RA 224,915 A→G 34.5% noncoding (1145/1542 nt) rrsH → 16S ribosomal RNA
RA 224,920 A→G 36.9% noncoding (1150/1542 nt) rrsH → 16S ribosomal RNA
RA 224,921 A→T 36.8% noncoding (1151/1542 nt) rrsH → 16S ribosomal RNA
RA 224,923 G→A 37.7% noncoding (1153/1542 nt) rrsH → 16S ribosomal RNA
RA 224,933 A→G 38.7% noncoding (1163/1542 nt) rrsH → 16S ribosomal RNA
RA 224,937 A→T 39.5% noncoding (1167/1542 nt) rrsH → 16S ribosomal RNA
RA 224,968 G→A 38.7% noncoding (1198/1542 nt) rrsH → 16S ribosomal RNA
RA 274,547 A→G 100% intergenic (‑206/‑2) insH ← / → mmuP IS5 transposase and trans‑activator/S‑methylmethionine transporter
MC JC 274,733 Δ97,240 bp 100% [mmuP]–[mhpD] 90 genes
RA 457,324 A→G 6.8% Q225Q (CAA→CAG)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,333 T→C 7.7% R228R (CGT→CGC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,336 A→G 7.8% K229K (AAA→AAG)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,338 A→T 7.6% H230L (CAT→CTT)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,339 T→G 7.4% H230Q (CAT→CAG)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,343 C→A 8.4% Q232K (CAG→AAG)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,345 G→C 8.3% Q232H (CAG→CAC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,351 A→G 7.9% E234E (GAA→GAG)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,355 T→A 7.9% L236M (TTG→ATG)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,357 G→T 8.1% L236F (TTG→TTT)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,361 G→T 7.8% V238F (GTT→TTT)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,363 T→C 7.7% V238V (GTT→GTC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,366 T→C 7.6% D239D (GAT→GAC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,372 T→C 7.9% S241S (TCT→TCC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,375 G→T 7.7% K242N (AAG→AAT)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,376 A→G 7.3% I243V (ATC→GTC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,384 T→C 7.8% F245F (TTT→TTC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,387 T→C 7.6% I246I (ATT→ATC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,388 T→G 7.9% C247G (TGT→GGT)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 457,392 G→C 7.6% G248A (GGC→GCC)  clpX → ATPase and‑specificity subunit of ClpX‑ClpP ATP‑dependent serine protease
RA 547,694 A→G 100% intergenic (+123/‑1156) fdrA → / → ylbF acyl‑CoA synthetase with NAD(P)‑binding Rossmann‑fold domain/hypothetical protein
RA 547,831 +G 100% intergenic (+260/‑1019) fdrA → / → ylbF acyl‑CoA synthetase with NAD(P)‑binding Rossmann‑fold domain/hypothetical protein
RA 556,858 A→T 100% L36Q (CTG→CAG)  folD ← bifunctional 5,10‑methylene‑tetrahydrofolate dehydrogenase/5,10‑methylene‑tetrahydrofolate cyclohydrolase
RA 569,996 G→C 100% intergenic (+345/‑120) ybcK → / → ybcL recombinase/kinase inhibitor
MC JC 654,214 Δ1,199 bp 100% insH insH
RA 725,818 A→G 5.9% N547N (AAT→AAC)  kdpB ← potassium translocating ATPase, subunit B
RA 725,822 C→G 8.5% G546A (GGC→GCC)  kdpB ← potassium translocating ATPase, subunit B
RA 725,827 C→T 10.6% E544E (GAG→GAA)  kdpB ← potassium translocating ATPase, subunit B
RA 725,830 T→C 10.7% K543K (AAA→AAG)  kdpB ← potassium translocating ATPase, subunit B
RA 725,840 T→G 12.9% Q540P (CAG→CCG)  kdpB ← potassium translocating ATPase, subunit B
RA 725,841 G→A 12.8% Q540* (CAG→TAG)  kdpB ← potassium translocating ATPase, subunit B
RA 725,842 G→C 12.9% T539T (ACC→ACG)  kdpB ← potassium translocating ATPase, subunit B
RA 725,845 G→A 12.7% G538G (GGC→GGT)  kdpB ← potassium translocating ATPase, subunit B
RA 725,848 G→A 12.6% S537S (TCC→TCT)  kdpB ← potassium translocating ATPase, subunit B
RA 725,850 A→T 12.4% S537T (TCC→ACC)  kdpB ← potassium translocating ATPase, subunit B
RA 725,857 C→T 12.3% A534A (GCG→GCA)  kdpB ← potassium translocating ATPase, subunit B
RA 725,863 C→G 12.4% A532A (GCG→GCC)  kdpB ← potassium translocating ATPase, subunit B
RA 725,866 G→C 12.3% V531V (GTC→GTG)  kdpB ← potassium translocating ATPase, subunit B
RA 725,883 G→A 16.5% L526L (CTG→TTG)  kdpB ← potassium translocating ATPase, subunit B
RA 725,884 C→T 16.5% A525A (GCG→GCA)  kdpB ← potassium translocating ATPase, subunit B
RA 725,890 A→T 18.3% A523A (GCT→GCA)  kdpB ← potassium translocating ATPase, subunit B
RA 726,501 A→C 3.4% S320A (TCG→GCG)  kdpB ← potassium translocating ATPase, subunit B
RA 726,502 C→A 3.2% A319A (GCG→GCT)  kdpB ← potassium translocating ATPase, subunit B
RA 726,519 G→A 3.1% L314F (CTC→TTC)  kdpB ← potassium translocating ATPase, subunit B
RA 726,535 T→C 3.0% K308K (AAA→AAG)  kdpB ← potassium translocating ATPase, subunit B
RA 726,538 A→G 2.9% D307D (GAT→GAC)  kdpB ← potassium translocating ATPase, subunit B
RA 726,541 C→T 2.9% L306L (CTG→CTA)  kdpB ← potassium translocating ATPase, subunit B
RA 726,544 T→C 2.9% L305L (CTA→CTG)  kdpB ← potassium translocating ATPase, subunit B
RA 726,550 A→C 3.4% V303V (GTT→GTG)  kdpB ← potassium translocating ATPase, subunit B
RA 726,551 A→G 3.4% V303A (GTT→GCT)  kdpB ← potassium translocating ATPase, subunit B
RA 726,552 C→T 3.4% V303I (GTT→ATT)  kdpB ← potassium translocating ATPase, subunit B
RA 726,554 T→G 3.4% D302A (GAC→GCC)  kdpB ← potassium translocating ATPase, subunit B
RA 726,556 A→G 3.4% V301V (GTT→GTC)  kdpB ← potassium translocating ATPase, subunit B
RA 726,565 T→A 3.1% A298A (GCA→GCT)  kdpB ← potassium translocating ATPase, subunit B
RA 726,568 C→G 3.2% A297A (GCG→GCC)  kdpB ← potassium translocating ATPase, subunit B
RA 726,571 T→C 3.3% E296E (GAA→GAG)  kdpB ← potassium translocating ATPase, subunit B
RA 726,577 T→C 3.2% A294A (GCA→GCG)  kdpB ← potassium translocating ATPase, subunit B
RA 726,583 T→G 3.2% G292G (GGA→GGC)  kdpB ← potassium translocating ATPase, subunit B
RA 749,354 C→A 100% P17P (CCG→CCT)  ybgO ← fimbrial‑like adhesin protein
RA 758,440 C→A 100% F110L (TTC→TTA)  sdhB → succinate dehydrogenase, FeS subunit
RA 815,429 G→C 3.9% L494L (CTG→CTC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,437 T→A 10.0% F497Y (TTC→TAC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,450 A→C 19.2% V501V (GTA→GTC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,453 G→T 19.5% G502G (GGG→GGT)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,456 C→T 19.2% I503I (ATC→ATT)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,460 T→C 18.9% L505L (TTA→CTA)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,462 A→G 19.0% L505L (TTA→TTG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,471 A→G 24.4% E508E (GAA→GAG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,474 T→C 24.8% G509G (GGT→GGC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,477 G→C 24.5% L510L (CTG→CTC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,480 T→C 25.2% D511D (GAT→GAC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,486 G→C 28.4% P513P (CCG→CCC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,489 A→G 28.8% E514E (GAA→GAG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,504 G→A 34.9% A519A (GCG→GCA)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,522 A→G 31.4% K525K (AAA→AAG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,525 A→G 30.7% E526E (GAA→GAG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,528 C→G 28.2% G527G (GGC→GGG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,532 C→T 26.5% L529L (CTG→TTG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,540 C→G 22.1% S531S (TCC→TCG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,543 A→G 20.4% E532E (GAA→GAG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,555 C→T 16.8% I536I (ATC→ATT)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,561 C→G 15.7% T538T (ACC→ACG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,573 G→C 12.6% A542A (GCG→GCC)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,576 A→G 11.1% A543A (GCA→GCG)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 815,579 T→A 9.6% R544R (CGT→CGA)  uvrB → excinulease of nucleotide excision repair, DNA damage recognition component
RA 846,307 G→C 6.4% T193T (ACC→ACG)  glnQ ← glutamine transporter subunit
RA 846,315 T→C 7.3% I191V (ATC→GTC)  glnQ ← glutamine transporter subunit
RA 846,316 C→G 7.3% V190V (GTG→GTC)  glnQ ← glutamine transporter subunit
RA 846,322 C→G 9.5% T188T (ACG→ACC)  glnQ ← glutamine transporter subunit
RA 846,328 C→A 7.9% G186G (GGG→GGT)  glnQ ← glutamine transporter subunit
RA 846,331 T→C 8.5% E185E (GAA→GAG)  glnQ ← glutamine transporter subunit
RA 846,334 T→A 9.7% E184D (GAA→GAT)  glnQ ← glutamine transporter subunit
RA 846,337 A→G 9.1% A183A (GCT→GCC)  glnQ ← glutamine transporter subunit
RA 846,344 T→C 9.0% D181G (GAT→GGT)  glnQ ← glutamine transporter subunit
RA 846,346 C→A 9.1% Q180H (CAG→CAT)  glnQ ← glutamine transporter subunit
RA 846,352 A→G 9.4% V178V (GTT→GTC)  glnQ ← glutamine transporter subunit
RA 846,355 C→G 9.5% K177N (AAG→AAC)  glnQ ← glutamine transporter subunit
RA 846,358 C→G 9.5% L176L (CTG→CTC)  glnQ ← glutamine transporter subunit
RA 846,361 C→A 9.3% V175V (GTG→GTT)  glnQ ← glutamine transporter subunit
RA 846,364 T→C 9.5% E174E (GAA→GAG)  glnQ ← glutamine transporter subunit
RA 846,368 T→C 9.6% H173R (CAT→CGT)  glnQ ← glutamine transporter subunit
RA 846,369 G→C 7.1% H173D (CAT→GAT)  glnQ ← glutamine transporter subunit
RA 846,371 C→A 7.1% R172L (CGC→CTC)  glnQ ← glutamine transporter subunit
RA 846,373 C→G 7.3% L171L (CTG→CTC)  glnQ ← glutamine transporter subunit
RA 846,376 T→C 10.1% E170E (GAA→GAG)  glnQ ← glutamine transporter subunit
RA 846,400 T→C 12.0% E162E (GAA→GAG)  glnQ ← glutamine transporter subunit
RA 846,406 A→G 8.2% F160F (TTT→TTC)  glnQ ← glutamine transporter subunit
RA 846,409 C→G 7.7% L159L (CTG→CTC)  glnQ ← glutamine transporter subunit
RA 846,415 C→T 6.4% M157I (ATG→ATA)  glnQ ← glutamine transporter subunit
RA 846,417 T→G 6.3% M157L (ATG→CTG)  glnQ ← glutamine transporter subunit
RA 846,418 T→C 5.7% K156K (AAA→AAG)  glnQ ← glutamine transporter subunit
RA 846,424 C→T 5.8% K154K (AAG→AAA)  glnQ ← glutamine transporter subunit
RA 846,426 T→C 5.9% K154E (AAG→GAG)  glnQ ← glutamine transporter subunit
RA 846,429 C→T 5.9% V153M (GTG→ATG)  glnQ ← glutamine transporter subunit
RA 846,430 C→G 5.9% A152A (GCG→GCC)  glnQ ← glutamine transporter subunit
RA 846,436 C→T 6.2% A150A (GCG→GCA)  glnQ ← glutamine transporter subunit
RA 846,439 G→A 6.5% R149R (CGC→CGT)  glnQ ← glutamine transporter subunit
RA 846,442 G→A 5.9% A148A (GCC→GCT)  glnQ ← glutamine transporter subunit
RA 846,448 C→G 5.6% A146A (GCG→GCC)  glnQ ← glutamine transporter subunit
RA 846,451 C→A 5.7% V145V (GTG→GTT)  glnQ ← glutamine transporter subunit
RA 846,454 A→T 5.7% R144R (CGT→CGA)  glnQ ← glutamine transporter subunit
RA 846,463 T→C 5.7% Q141Q (CAA→CAG)  glnQ ← glutamine transporter subunit
RA 887,234 C→A 100% A176A (GCG→GCT)  ybjJ ← transporter
RA 987,574 G→T 100% intergenic (‑170/+433) ompF ← / ← asnS outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase
RA 1,093,686 T→C 100% V130A (GTA→GCA)  ycdT → diguanylate cyclase
RA 1,097,580 C→T 22.3% intergenic (+329/+226) ycdU → / ← serX inner membrane protein/tRNA‑Ser
RA 1,170,573 C→T 100% intergenic (‑164/‑77) ycfQ ← / → ycfR DNA‑binding transcriptional regulator/hypothetical protein
RA 1,282,104 T→G 2.3% C222G (TGC→GGC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,105 G→C 2.3% C222S (TGC→TCC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,110 T→C 2.4% L224L (TTG→CTG)  narG → nitrate reductase 1 subunit alpha
RA 1,282,115 T→A 2.5% P225P (CCT→CCA)  narG → nitrate reductase 1 subunit alpha
RA 1,282,118 T→G 2.6% P226P (CCT→CCG)  narG → nitrate reductase 1 subunit alpha
RA 1,282,121 G→A 3.0% A227A (GCG→GCA)  narG → nitrate reductase 1 subunit alpha
RA 1,282,124 T→A 2.5% S228S (TCT→TCA)  narG → nitrate reductase 1 subunit alpha
RA 1,282,127 G→A 2.5% P229P (CCG→CCA)  narG → nitrate reductase 1 subunit alpha
RA 1,282,130 A→G 2.6% Q230Q (CAA→CAG)  narG → nitrate reductase 1 subunit alpha
RA 1,282,135 G→T 2.6% W232L (TGG→TTG)  narG → nitrate reductase 1 subunit alpha
RA 1,282,136 G→C 2.6% W232C (TGG→TGC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,142 G→C 2.5% E234D (GAG→GAC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,145 A→G 2.5% Q235Q (CAA→CAG)  narG → nitrate reductase 1 subunit alpha
RA 1,282,148 T→C 2.4% T236T (ACT→ACC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,154 A→T 2.4% V238V (GTA→GTT)  narG → nitrate reductase 1 subunit alpha
RA 1,282,157 G→A 2.5% P239P (CCG→CCA)  narG → nitrate reductase 1 subunit alpha
RA 1,282,160 A→G 2.4% E240E (GAA→GAG)  narG → nitrate reductase 1 subunit alpha
RA 1,282,163 T→C 2.6% S241S (TCT→TCC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,165 C→G 2.6% A242G (GCT→GGT)  narG → nitrate reductase 1 subunit alpha
RA 1,282,174 A→T 2.5% Y245F (TAC→TTC)  narG → nitrate reductase 1 subunit alpha
RA 1,282,178 C→T 2.5% N246N (AAC→AAT)  narG → nitrate reductase 1 subunit alpha
MC JC 1,301,041 Δ1,336 bp 100% insC–insD insC, insD
RA 1,318,876 G→A 100% P21S (CCT→TCT)  trpA ← tryptophan synthase subunit alpha
MC JC 1,413,639 Δ23,060 bp 100% [ydaO]–ynaE 30 genes
RA 1,483,588 G→A 100% L322L (CTG→CTA)  ynbD → phosphatase, inner membrane protein
RA 1,485,314 G→C 15.7% A161A (GCG→GCC)  hrpA → ATP‑dependent helicase
RA 1,485,320 C→T 15.4% I163I (ATC→ATT)  hrpA → ATP‑dependent helicase
RA 1,485,321 C→G 15.4% Q164E (CAG→GAG)  hrpA → ATP‑dependent helicase
RA 1,485,322 A→G 14.9% Q164R (CAG→CGG)  hrpA → ATP‑dependent helicase
RA 1,485,323 G→C 15.4% Q164H (CAG→CAC)  hrpA → ATP‑dependent helicase
RA 1,485,325 A→G 15.1% Q165R (CAA→CGA)  hrpA → ATP‑dependent helicase
RA 1,485,326 A→C 15.1% Q165H (CAA→CAC)  hrpA → ATP‑dependent helicase
RA 1,485,332 C→A 14.6% R167R (CGC→CGA)  hrpA → ATP‑dependent helicase
RA 1,485,336 C→T 14.8% L169L (CTG→TTG)  hrpA → ATP‑dependent helicase
RA 1,485,339 A→C 9.9% M170L (ATG→CTG)  hrpA → ATP‑dependent helicase
RA 1,485,340 T→G 9.4% M170R (ATG→AGG)  hrpA → ATP‑dependent helicase
RA 1,485,341 G→T 9.4% M170I (ATG→ATT)  hrpA → ATP‑dependent helicase
RA 1,485,342 C→G 10.2% Q171E (CAG→GAG)  hrpA → ATP‑dependent helicase
RA 1,485,353 T→C 17.5% T174T (ACT→ACC)  hrpA → ATP‑dependent helicase
RA 1,485,359 T→C 20.0% I176I (ATT→ATC)  hrpA → ATP‑dependent helicase
RA 1,485,362 T→C 20.1% I177I (ATT→ATC)  hrpA → ATP‑dependent helicase
RA 1,485,365 C→T 19.2% D178D (GAC→GAT)  hrpA → ATP‑dependent helicase
RA 1,485,368 A→G 19.0% E179E (GAA→GAG)  hrpA → ATP‑dependent helicase
RA 1,485,386 G→C 19.9% L185L (CTG→CTC)  hrpA → ATP‑dependent helicase
RA 1,485,389 T→C 17.8% N186N (AAT→AAC)  hrpA → ATP‑dependent helicase
RA 1,485,395 T→C 13.7% D188D (GAT→GAC)  hrpA → ATP‑dependent helicase
RA 1,485,398 T→C 13.7% F189F (TTT→TTC)  hrpA → ATP‑dependent helicase
RA 1,485,399 T→C 13.8% L190L (TTG→CTG)  hrpA → ATP‑dependent helicase
RA 1,485,404 C→G 13.0% L191L (CTC→CTG)  hrpA → ATP‑dependent helicase
RA 1,485,407 C→A 12.7% G192G (GGC→GGA)  hrpA → ATP‑dependent helicase
RA 1,485,413 G→A 11.4% L194L (TTG→TTA)  hrpA → ATP‑dependent helicase
RA 1,485,416 A→G 11.6% K195K (AAA→AAG)  hrpA → ATP‑dependent helicase
RA 1,485,417 G→C 11.3% E196Q (GAG→CAG)  hrpA → ATP‑dependent helicase
RA 1,485,419 G→T 12.4% E196D (GAG→GAT)  hrpA → ATP‑dependent helicase
RA 1,485,420 T→A 12.3% L197M (TTG→ATG)  hrpA → ATP‑dependent helicase
RA 1,485,422 G→T 13.2% L197F (TTG→TTT)  hrpA → ATP‑dependent helicase
RA 1,485,430 G→A 14.0% R200Q (CGG→CAG)  hrpA → ATP‑dependent helicase
RA 1,485,434 T→C 13.2% R201R (CGT→CGC)  hrpA → ATP‑dependent helicase
RA 1,485,437 T→A 12.2% P202P (CCT→CCA)  hrpA → ATP‑dependent helicase
RA 1,485,440 C→T 11.1% D203D (GAC→GAT)  hrpA → ATP‑dependent helicase
RA 1,485,443 A→G 10.1% L204L (CTA→CTG)  hrpA → ATP‑dependent helicase
RA 1,485,446 A→G 10.1% K205K (AAA→AAG)  hrpA → ATP‑dependent helicase
RA 1,485,461 C→G 5.2% S210S (TCC→TCG)  hrpA → ATP‑dependent helicase
RA 1,485,870 C→A 4.6% P347T (CCC→ACC)  hrpA → ATP‑dependent helicase
RA 1,486,010 T→C 3.7% Y393Y (TAT→TAC)  hrpA → ATP‑dependent helicase
RA 1,486,011 T→A 3.7% S394T (TCC→ACC)  hrpA → ATP‑dependent helicase
RA 1,486,012 C→G 3.6% S394C (TCC→TGC)  hrpA → ATP‑dependent helicase
RA 1,486,016 A→G 3.9% E395E (GAA→GAG)  hrpA → ATP‑dependent helicase
RA 1,486,019 C→G 3.8% D396E (GAC→GAG)  hrpA → ATP‑dependent helicase
RA 1,486,022 T→A 3.8% D397E (GAT→GAA)  hrpA → ATP‑dependent helicase
RA 1,486,025 C→T 3.7% F398F (TTC→TTT)  hrpA → ATP‑dependent helicase
RA 1,486,031 G→T 3.7% S400S (TCG→TCT)  hrpA → ATP‑dependent helicase
RA 1,486,037 G→C 4.2% P402P (CCG→CCC)  hrpA → ATP‑dependent helicase
RA 1,486,046 C→G 5.9% T405T (ACC→ACG)  hrpA → ATP‑dependent helicase
RA 1,486,064 T→C 5.6% R411R (CGT→CGC)  hrpA → ATP‑dependent helicase
RA 1,486,070 C→T 5.7% N413N (AAC→AAT)  hrpA → ATP‑dependent helicase
RA 1,486,073 G→C 5.5% L414L (CTG→CTC)  hrpA → ATP‑dependent helicase
RA 1,486,076 C→T 5.6% A415A (GCC→GCT)  hrpA → ATP‑dependent helicase
RA 1,486,083 A→G 5.7% I418V (ATT→GTT)  hrpA → ATP‑dependent helicase
RA 1,486,085 T→A 5.9% I418I (ATT→ATA)  hrpA → ATP‑dependent helicase
RA 1,486,086 T→C 5.9% L419L (TTG→CTG)  hrpA → ATP‑dependent helicase
RA 1,496,775 Δ1 bp 100% coding (11/924 nt) ydcI ← DNA‑binding transcriptional regulator
RA 1,539,877 T→C 4.2% I231V (ATC→GTC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,878 T→C 4.3% K230K (AAA→AAG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,881 T→C 4.3% K229K (AAA→AAG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,887 C→G 6.4% P227P (CCG→CCC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,890 A→G 6.6% C226C (TGT→TGC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,897 C→G 6.6% S224T (AGC→ACC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,898 T→A 6.6% S224C (AGC→TGC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,899 T→G 6.6% I223I (ATA→ATC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,901 T→C 6.7% I223V (ATA→GTA)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,907 A→T 6.8% L221M (TTG→ATG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,908 A→G 6.8% R220R (CGT→CGC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,914 G→A 7.2% G218G (GGC→GGT)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,917 A→G 7.3% R217R (CGT→CGC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,932 A→G 10.5% D212D (GAT→GAC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,935 A→G 10.9% I211I (ATT→ATC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,937 T→C 10.9% I211V (ATT→GTT)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,958 C→T 10.5% E204K (GAA→AAA)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,968 G→C 7.8% I200M (ATC→ATG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,978 C→G 6.0% S197T (AGC→ACC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,979 T→A 5.8% S197C (AGC→TGC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,988 T→A 6.1% T194S (ACC→TCC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,989 C→A 5.8% A193A (GCG→GCT)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,991 C→A 6.2% A193S (GCG→TCG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,995 G→A 5.7% C191C (TGC→TGT)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,539,999 C→G 5.9% S190T (AGC→ACC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,001 G→C 6.1% P189P (CCC→CCG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,004 A→G 5.9% N188N (AAT→AAC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,007 G→C 5.8% L187L (CTC→CTG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,009 G→A 5.9% L187F (CTC→TTC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,016 T→C 6.1% E184E (GAA→GAG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,019 G→A 5.6% C183C (TGC→TGT)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,022 C→G 3.9% L182L (CTG→CTC)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,540,024 G→T 3.9% L182M (CTG→ATG)  narY ← nitrate reductase 2 (NRZ) subunit beta
RA 1,615,814 C→A 100% D202Y (GAC→TAC)  yneI ← aldehyde dehydrogenase
RA 1,669,599 Δ1 bp 100% coding (680/1221 nt) dgsA ← DNA‑binding transcriptional repressor
RA 1,844,073 G→A 100% intergenic (‑224/‑12) ynjH ← / → gdhA hypothetical protein/glutamate dehydrogenase, NADP‑specific
RA 1,864,922 C→G 4.2% S146S (TCC→TCG)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,931 C→T 8.7% S149S (TCC→TCT)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,956 C→A 9.0% L158M (CTG→ATG)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,964 A→G 9.3% K160K (AAA→AAG)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,968 A→C 9.1% I162L (ATC→CTC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,970 C→G 9.1% I162M (ATC→ATG)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,971 A→G 9.3% N163D (AAC→GAC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,976 T→C 9.6% D164D (GAT→GAC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,979 C→G 9.5% N165K (AAC→AAG)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,988 +G 10.1% coding (504/996 nt) gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,990 T→G 10.1% I169S (ATC→AGC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,993 Δ1 bp 9.6% coding (509/996 nt) gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,864,994 A→C 9.6% E170D (GAA→GAC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,865,000 G→C 9.9% L172L (CTG→CTC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,865,010 G→A 6.9% V176I (GTT→ATT)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,865,012 T→C 6.9% V176V (GTT→GTC)  gapA → glyceraldehyde‑3‑phosphate dehydrogenase A
RA 1,918,872 T→A 100% S301T (TCC→ACC)  yebS → inner membrane protein
RA 1,973,476 G→A 100% L310L (CTC→CTT)  tar ← methyl‑accepting chemotaxis protein II
RA 2,005,401 C→T 100% E115K (GAA→AAA)  fliC ← flagellar filament structural protein
RA 2,170,094 C→A 100% intergenic (‑437/+32) ogrK ← / ← yegR DNA‑binding transcriptional regulator/hypothetical protein
RA 2,251,498 C→A 3.3% W123C (TGG→TGT)  lysP ← lysine transporter
RA 2,251,499 C→T 3.3% W123* (TGG→TAG)  lysP ← lysine transporter
RA 2,251,503 T→G 4.0% S122R (AGC→CGC)  lysP ← lysine transporter
RA 2,251,507 G→C 4.4% V120V (GTC→GTG)  lysP ← lysine transporter
RA 2,251,514 T→G 4.9% Q118P (CAG→CCG)  lysP ← lysine transporter
RA 2,251,515 G→C 4.8% Q118E (CAG→GAG)  lysP ← lysine transporter
RA 2,251,519 T→A 4.9% A116A (GCA→GCT)  lysP ← lysine transporter
RA 2,251,522 A→G 4.5% V115V (GTT→GTC)  lysP ← lysine transporter
RA 2,251,525 C→G 4.5% L114L (CTG→CTC)  lysP ← lysine transporter
RA 2,251,528 G→C 4.3% D113E (GAC→GAG)  lysP ← lysine transporter
RA 2,251,531 A→T 4.2% V112V (GTT→GTA)  lysP ← lysine transporter
RA 2,251,532 A→G 4.3% V112A (GTT→GCT)  lysP ← lysine transporter
RA 2,251,537 G→C 4.1% I110M (ATC→ATG)  lysP ← lysine transporter
RA 2,251,539 T→C 4.1% I110V (ATC→GTC)  lysP ← lysine transporter
RA 2,251,543 C→A 4.0% V108V (GTG→GTT)  lysP ← lysine transporter
RA 2,251,545 C→T 4.0% V108M (GTG→ATG)  lysP ← lysine transporter
RA 2,251,555 G→A 4.0% Y104Y (TAC→TAT)  lysP ← lysine transporter
RA 2,251,556 T→A 4.0% Y104F (TAC→TTC)  lysP ← lysine transporter
RA 2,251,575 G→T 4.5% L98M (CTG→ATG)  lysP ← lysine transporter
RA 2,251,579 G→A 4.2% F96F (TTC→TTT)  lysP ← lysine transporter
RA 2,251,585 A→G 2.6% F94F (TTT→TTC)  lysP ← lysine transporter
RA 2,262,756 A→C 48.2% intergenic (‑126/+297) yeiC ← / ← fruA kinase/fused fructose‑specific PTS enzyme IIB'BC components
MC JC 2,320,795 Δ1,336 bp 100% insD–insC insD, insC
RA 2,406,075 C→T 100% V51I (GTT→ATT)  nuoF ← NADH:ubiquinone oxidoreductase, chain F
RA 2,416,102 G→A 100% L233L (CTG→TTG)  yfbS ← transporter
RA 2,538,628 C→T 100% T258T (ACC→ACT)  cysK → cysteine synthase A, O‑acetylserine sulfhydrolase A subunit
RA 2,705,400 C→G 4.7% V127V (GTG→GTC)  lepA ← GTP binding membrane protein
RA 2,705,402 C→T 4.6% V127M (GTG→ATG)  lepA ← GTP binding membrane protein
RA 2,705,403 A→G 4.8% V126V (GTT→GTC)  lepA ← GTP binding membrane protein
RA 2,705,405 C→T 4.5% V126I (GTT→ATT)  lepA ← GTP binding membrane protein
RA 2,705,409 G→C 4.8% L124L (CTC→CTG)  lepA ← GTP binding membrane protein
RA 2,705,412 A→G 4.8% D123D (GAT→GAC)  lepA ← GTP binding membrane protein
RA 2,705,415 C→A 4.4% M122I (ATG→ATT)  lepA ← GTP binding membrane protein
RA 2,705,416 A→T 4.5% M122K (ATG→AAG)  lepA ← GTP binding membrane protein
RA 2,705,427 G→C 4.6% T118T (ACC→ACG)  lepA ← GTP binding membrane protein
RA 2,705,428 G→A 4.8% T118I (ACC→ATC)  lepA ← GTP binding membrane protein
RA 2,705,433 G→C 4.5% C116W (TGC→TGG)  lepA ← GTP binding membrane protein
RA 2,705,434 C→A 4.6% C116F (TGC→TTC)  lepA ← GTP binding membrane protein
RA 2,705,435 A→G 4.7% C116R (TGC→CGC)  lepA ← GTP binding membrane protein
RA 2,705,439 T→G 4.7% A114A (GCA→GCC)  lepA ← GTP binding membrane protein
RA 2,705,445 G→T 5.0% T112T (ACC→ACA)  lepA ← GTP binding membrane protein
RA 2,705,448 T→C 4.6% Q111Q (CAA→CAG)  lepA ← GTP binding membrane protein
RA 2,705,457 T→G 3.0% V108V (GTA→GTC)  lepA ← GTP binding membrane protein
RA 2,705,459 C→T 2.9% V108I (GTA→ATA)  lepA ← GTP binding membrane protein
RA 2,705,463 C→T 2.1% Q106Q (CAG→CAA)  lepA ← GTP binding membrane protein
RA 2,705,467 C→G 2.1% G105A (GGG→GCG)  lepA ← GTP binding membrane protein
RA 2,705,469 G→A 2.1% A104A (GCC→GCT)  lepA ← GTP binding membrane protein
RA 2,731,753 C→G 3.5% L359F (TTG→TTC)  clpB ← protein disaggregation chaperone
RA 2,731,755 A→C 3.5% L359V (TTG→GTG)  clpB ← protein disaggregation chaperone
RA 2,731,756 T→C 3.5% E358E (GAA→GAG)  clpB ← protein disaggregation chaperone
RA 2,731,762 A→G 13.4% R356R (CGT→CGC)  clpB ← protein disaggregation chaperone
RA 2,731,768 T→C 17.0% K354K (AAA→AAG)  clpB ← protein disaggregation chaperone
RA 2,731,786 C→G 19.1% A348A (GCG→GCC)  clpB ← protein disaggregation chaperone
RA 2,731,794 T→C 19.4% T346A (ACC→GCC)  clpB ← protein disaggregation chaperone
RA 2,731,795 A→G 19.4% D345D (GAT→GAC)  clpB ← protein disaggregation chaperone
RA 2,731,798 T→C 19.5% E344E (GAA→GAG)  clpB ← protein disaggregation chaperone
RA 2,731,804 A→G 19.7% S342S (TCT→TCC)  clpB ← protein disaggregation chaperone
RA 2,731,805 G→C 19.6% S342C (TCT→TGT)  clpB ← protein disaggregation chaperone
RA 2,731,806 A→T 19.5% S342T (TCT→ACT)  clpB ← protein disaggregation chaperone
RA 2,731,807 A→C 19.5% P341P (CCT→CCG)  clpB ← protein disaggregation chaperone
RA 2,731,813 G→A 19.8% A339A (GCC→GCT)  clpB ← protein disaggregation chaperone
RA 2,731,814 G→C 19.8% A339G (GCC→GGC)  clpB ← protein disaggregation chaperone
RA 2,731,816 A→G 20.8% V338V (GTT→GTC)  clpB ← protein disaggregation chaperone
RA 2,731,822 C→G 21.0% V336V (GTG→GTC)  clpB ← protein disaggregation chaperone
RA 2,731,825 T→C 19.7% K335K (AAA→AAG)  clpB ← protein disaggregation chaperone
RA 2,731,827 T→G 19.7% K335Q (AAA→CAA)  clpB ← protein disaggregation chaperone
RA 2,731,840 T→C 19.6% E330E (GAA→GAG)  clpB ← protein disaggregation chaperone
RA 2,731,855 T→C 7.8% K325K (AAA→AAG)  clpB ← protein disaggregation chaperone
RA 2,731,858 T→C 7.8% E324E (GAA→GAG)  clpB ← protein disaggregation chaperone
RA 2,731,861 A→G 5.0% I323I (ATT→ATC)  clpB ← protein disaggregation chaperone
RA 2,739,249 A→G 6.0% F186F (TTT→TTC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,252 A→G 6.4% G185G (GGT→GGC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,255 A→G 6.2% V184V (GTT→GTC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,257 C→T 6.2% V184I (GTT→ATT)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,258 C→G 6.2% P183P (CCG→CCC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,270 C→T 5.7% G179G (GGG→GGA)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,276 G→A 5.7% A177A (GCC→GCT)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,279 C→G 5.7% M176I (ATG→ATC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,281 T→G 5.8% M176L (ATG→CTG)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,282 T→C 6.1% E175E (GAA→GAG)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,284 C→G 5.6% E175Q (GAA→CAA)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,285 A→G 5.9% R174R (CGT→CGC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,292 G→A 5.9% T172I (ACT→ATT)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,293 T→C 5.6% T172A (ACT→GCT)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,294 T→C 5.6% Q171Q (CAA→CAG)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,300 T→C 5.5% E169E (GAA→GAG)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,306 T→G 5.8% T167T (ACA→ACC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,309 A→G 5.7% R166R (CGT→CGC)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,312 A→C 5.8% A165A (GCT→GCG)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,739,321 T→C 5.3% A162A (GCA→GCG)  aroF ← 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tyrosine‑repressible
RA 2,801,044 C→G 7.9% A347A (GCC→GCG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,048 G→C 7.8% D349H (GAT→CAT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,050 T→G 7.8% D349E (GAT→GAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,060 C→A 6.8% R353R (CGA→AGA)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,061 G→C 7.3% R353P (CGA→CCA)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,062 A→C 6.8% R353R (CGA→CGC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,063 C→A 6.9% L354M (CTG→ATG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,065 G→C 7.5% L354L (CTG→CTC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,068 A→T 7.4% A355A (GCA→GCT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,071 A→G 7.5% E356E (GAA→GAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,074 C→T 7.3% I357I (ATC→ATT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,092 T→C 9.5% Y363Y (TAT→TAC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,095 C→G 9.6% P364P (CCC→CCG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,107 T→C 9.2% Y368Y (TAT→TAC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,110 A→G 9.3% E369E (GAA→GAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,119 A→T 9.7% V372V (GTA→GTT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,125 T→C 8.9% R374R (CGT→CGC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,128 T→G 8.4% A375A (GCT→GCG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,134 T→G 5.7% P377P (CCT→CCG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,801,161 T→C 2.3% N386N (AAT→AAC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,052 C→A 10.6% A683A (GCC→GCA)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,067 C→T 10.3% I688I (ATC→ATT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,070 A→G 10.6% K689K (AAA→AAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,073 G→T 9.6% T690T (ACG→ACT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,098 A→G 9.2% M699V (ATG→GTG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,100 G→T 9.5% M699I (ATG→ATT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,109 A→G 9.5% E702E (GAA→GAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,112 C→T 9.2% G703G (GGC→GGT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,118 A→G 6.4% E705E (GAA→GAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,119 A→G 6.4% I706V (ATT→GTT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,121 T→C 6.3% I706I (ATT→ATC)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,124 A→G 6.2% E707E (GAA→GAG)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,127 C→T 6.5% G708G (GGC→GGT)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,133 C→A 5.0% V710V (GTC→GTA)  nrdE → ribonucleoside‑diphosphate reductase 2 subunit alpha
RA 2,802,195 A→C 6.1% K13T (AAG→ACG)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,200 T→C 6.2% S15P (TCT→CCT)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,205 C→T 5.9% D16D (GAC→GAT)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,208 T→C 5.8% D17D (GAT→GAC)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,211 A→G 5.9% K18K (AAA→AAG)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,217 G→C 5.7% L20L (CTG→CTC)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,227 A→G 5.6% N24D (AAT→GAT)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,232 C→T 5.7% R25R (CGC→CGT)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,241 C→T 5.5% S28S (AGC→AGT)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,244 T→C 5.7% N29N (AAT→AAC)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,251 C→T 5.7% L32L (CTA→TTA)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,253 A→G 5.7% L32L (CTA→CTG)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,256 A→G 5.7% P33P (CCA→CCG)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,802,277 C→T 4.9% N40N (AAC→AAT)  nrdF → ribonucleoside‑diphosphate reductase 2 subunit beta, ferritin‑like
RA 2,865,228 A→G 13.2% L288P (CTG→CCG)  rpoS ← RNA polymerase, sigma S (sigma 38) factor
JC 2,865,274 +46 bp 49.0% coding (817/876 nt) rpoS ← RNA polymerase, sigma S (sigma 38) factor
JC 2,865,278 +92 bp 26.0% coding (813/876 nt) rpoS ← RNA polymerase, sigma S (sigma 38) factor
RA 2,866,111 A→G 100% intergenic (‑21/+159) rpoS ← / ← nlpD RNA polymerase, sigma S (sigma 38) factor/outer membrane lipoprotein
RA 2,908,106 G→A 4.7% L73L (CTG→TTG)  pyrG ← CTP synthetase
RA 2,908,122 A→T 3.9% A67A (GCT→GCA)  pyrG ← CTP synthetase
RA 2,908,125 G→A 4.0% G66G (GGC→GGT)  pyrG ← CTP synthetase
RA 2,908,134 A→G 3.6% T63T (ACT→ACC)  pyrG ← CTP synthetase
RA 2,908,137 A→G 3.7% V62V (GTT→GTC)  pyrG ← CTP synthetase
RA 2,908,143 C→G 3.8% V60V (GTG→GTC)  pyrG ← CTP synthetase
RA 2,908,146 T→C 3.7% E59E (GAA→GAG)  pyrG ← CTP synthetase
RA 2,908,149 C→G 3.8% G58G (GGG→GGC)  pyrG ← CTP synthetase
RA 2,908,155 T→C 3.8% Q56Q (CAA→CAG)  pyrG ← CTP synthetase
RA 2,908,160 T→A 3.4% I55F (ATC→TTC)  pyrG ← CTP synthetase
RA 2,908,161 T→G 3.4% P54P (CCA→CCC)  pyrG ← CTP synthetase
RA 2,908,165 C→T 3.4% S53N (AGC→AAC)  pyrG ← CTP synthetase
RA 2,908,170 A→G 3.1% T51T (ACT→ACC)  pyrG ← CTP synthetase
RA 2,908,173 A→G 4.0% G50G (GGT→GGC)  pyrG ← CTP synthetase
RA 2,908,176 T→C 3.5% P49P (CCA→CCG)  pyrG ← CTP synthetase
RA 2,908,179 A→G 3.6% D48D (GAT→GAC)  pyrG ← CTP synthetase
RA 2,908,182 G→C 2.8% V47V (GTC→GTG)  pyrG ← CTP synthetase
RA 2,908,185 G→A 2.8% N46N (AAC→AAT)  pyrG ← CTP synthetase
RA 2,908,190 T→G 2.5% I45L (ATC→CTC)  pyrG ← CTP synthetase
RA 3,003,330 G→A 100% L371L (CTC→CTT)  ygeV ← DNA‑binding transcriptional regulator
RA 3,033,057 G→A 6.2% I258I (ATC→ATT)  lysS ← lysine tRNA synthetase
RA 3,033,060 T→C 6.5% E257E (GAA→GAG)  lysS ← lysine tRNA synthetase
RA 3,033,063 G→A 6.2% F256F (TTC→TTT)  lysS ← lysine tRNA synthetase
RA 3,033,066 T→G 6.1% V255V (GTA→GTC)  lysS ← lysine tRNA synthetase
RA 3,033,069 A→T 6.0% R254R (CGT→CGA)  lysS ← lysine tRNA synthetase
RA 3,033,075 G→C 6.1% F252L (TTC→TTG)  lysS ← lysine tRNA synthetase
RA 3,033,077 A→T 6.1% F252I (TTC→ATC)  lysS ← lysine tRNA synthetase
RA 3,033,078 G→A 6.0% G251G (GGC→GGT)  lysS ← lysine tRNA synthetase
RA 3,033,081 A→G 6.5% G250G (GGT→GGC)  lysS ← lysine tRNA synthetase
RA 3,033,084 A→G 6.4% V249V (GTT→GTC)  lysS ← lysine tRNA synthetase
RA 3,033,087 C→G 6.5% V248V (GTG→GTC)  lysS ← lysine tRNA synthetase
RA 3,033,089 +G 6.4% coding (742/1518 nt) lysS ← lysine tRNA synthetase
RA 3,033,093 Δ1 bp 6.2% coding (738/1518 nt) lysS ← lysine tRNA synthetase
RA 3,033,103 T→A 6.3% Y243F (TAC→TTC)  lysS ← lysine tRNA synthetase
RA 3,033,108 T→C 6.4% E241E (GAA→GAG)  lysS ← lysine tRNA synthetase
RA 3,033,120 A→G 6.6% R237R (CGT→CGC)  lysS ← lysine tRNA synthetase
RA 3,049,815 G→T 100% R387S (CGC→AGC)  visC ← oxidoreductase
JC 3,070,186 Δ3 bp 5.0% coding (1091‑1093/1164 nt) pgk ← phosphoglycerate kinase
RA 3,124,070 Δ1 bp 3.0% coding (46/1224 nt) glcF ← glycolate oxidase iron‑sulfur subunit
RA 3,124,071 Δ1 bp 3.0% coding (45/1224 nt) glcF ← glycolate oxidase iron‑sulfur subunit
JC 3,175,000 Δ3 bp 15.9% coding (488‑490/828 nt) cpdA ← cyclic 3',5'‑adenosine monophosphate phosphodiesterase
RA 3,175,450 T→A 1.9% R14* (AGA→TGA)  cpdA ← cyclic 3',5'‑adenosine monophosphate phosphodiesterase
RA 3,270,195 G→T 5.4% intergenic (+738/+285) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,206 G→T 5.2% intergenic (+749/+274) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,220 G→T 4.7% intergenic (+763/+260) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,221 T→A 4.7% intergenic (+764/+259) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,225 Δ1 bp 4.7% intergenic (+768/+255) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,226 C→G 4.5% intergenic (+769/+254) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,228 G→T 5.1% intergenic (+771/+252) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,229 A→G 4.6% intergenic (+772/+251) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,231 T→A 4.7% intergenic (+774/+249) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,232 G→A 4.7% intergenic (+775/+248) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,234 T→C 4.7% intergenic (+777/+246) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,237 C→T 4.7% intergenic (+780/+243) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,238 A→T 4.7% intergenic (+781/+242) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,245 +T 4.9% intergenic (+788/+235) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,265 C→T 4.4% intergenic (+808/+215) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,275 T→C 4.5% intergenic (+818/+205) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,270,279 T→G 4.5% intergenic (+822/+201) yhaC → / ← garK hypothetical protein/glycerate kinase I
RA 3,306,717 G→A 4.2% I333I (ATC→ATT)  deaD ← ATP‑dependent RNA helicase
RA 3,306,720 A→G 4.3% R332R (CGT→CGC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,726 A→G 4.3% V330V (GTT→GTC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,732 A→G 4.4% S328S (TCT→TCC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,738 A→G 4.4% S326S (TCT→TCC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,740 A→T 4.5% S326T (TCT→ACT)  deaD ← ATP‑dependent RNA helicase
RA 3,306,741 A→G 4.2% D325D (GAT→GAC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,744 C→G 4.5% M324I (ATG→ATC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,745 A→T 4.5% M324K (ATG→AAG)  deaD ← ATP‑dependent RNA helicase
RA 3,306,746 T→G 4.5% M324L (ATG→CTG)  deaD ← ATP‑dependent RNA helicase
RA 3,306,750 G→A 6.1% I322I (ATC→ATT)  deaD ← ATP‑dependent RNA helicase
RA 3,306,753 A→G 6.5% D321D (GAT→GAC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,762 A→G 6.3% V318V (GTT→GTC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,765 T→C 6.2% V317V (GTA→GTG)  deaD ← ATP‑dependent RNA helicase
RA 3,306,768 C→G 6.4% L316L (CTG→CTC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,769 A→T 6.1% L316Q (CTG→CAG)  deaD ← ATP‑dependent RNA helicase
RA 3,306,772 C→G 6.2% S315T (AGC→ACC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,773 T→A 6.3% S315C (AGC→TGC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,774 G→A 6.3% I314I (ATC→ATT)  deaD ← ATP‑dependent RNA helicase
RA 3,306,777 A→G 6.5% R313R (CGT→CGC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,780 C→G 6.5% E312D (GAG→GAC)  deaD ← ATP‑dependent RNA helicase
RA 3,306,798 G→A 5.2% A306A (GCC→GCT)  deaD ← ATP‑dependent RNA helicase
RA 3,306,801 T→A 4.1% A305A (GCA→GCT)  deaD ← ATP‑dependent RNA helicase
RA 3,314,445 C→G 11.2% V475V (GTG→GTC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,448 A→G 11.2% G474G (GGT→GGC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,454 G→A 14.5% D472D (GAC→GAT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,457 G→A 14.7% A471A (GCC→GCT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,460 A→T 14.1% A470A (GCT→GCA)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,472 G→A 14.4% V466V (GTC→GTT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,474 C→T 14.2% V466I (GTC→ATC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,475 T→C 14.2% V465V (GTA→GTG)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,476 A→G 14.4% V465A (GTA→GCA)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,481 G→A 14.5% D463D (GAC→GAT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,484 C→G 14.6% T462T (ACG→ACC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,487 T→C 14.6% A461A (GCA→GCG)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,489 C→A 14.7% A461S (GCA→TCA)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,492 G→T 14.7% Q460K (CAG→AAG)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,511 T→G 16.2% S453S (TCA→TCC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,513 A→C 16.3% S453A (TCA→GCA)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,514 A→G 16.3% T452T (ACT→ACC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,523 G→C 18.6% A449A (GCC→GCG)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,524 G→T 18.0% A449D (GCC→GAC)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,529 C→A 12.2% G447G (GGG→GGT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,532 C→A 12.2% P446P (CCG→CCT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,538 G→A 6.0% D444D (GAC→GAT)  infB ← fused protein chain initiation factor 2, IF2
RA 3,314,543 G→A 3.1% L443L (CTG→TTG)  infB ← fused protein chain initiation factor 2, IF2
RA 3,326,032 G→A 3.9% I253I (ATC→ATT)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,035 T→C 3.8% E252E (GAA→GAG)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,038 A→G 3.8% D251D (GAT→GAC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,044 A→G 8.3% F249F (TTT→TTC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,050 G→A 10.8% I247I (ATC→ATT)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,059 Δ1 bp 11.8% coding (732/1935 nt) ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,062 C→T 11.4% A243A (GCG→GCA)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,064 C→T 11.7% A243T (GCG→ACG)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,067 +C 12.0% coding (724/1935 nt) ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,071 C→G 12.2% A240A (GCG→GCC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,077 T→A 12.1% E238D (GAA→GAT)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,079 C→T 12.2% E238K (GAA→AAA)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,080 G→A 12.1% F237F (TTC→TTT)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,085 T→A 12.0% M236L (ATG→TTG)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,092 A→G 12.3% V233V (GTT→GTC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,098 G→A 12.4% S231S (TCC→TCT)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,101 T→G 12.6% A230A (GCA→GCC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,107 C→G 12.6% V228V (GTG→GTC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,125 T→G 10.3% V222V (GTA→GTC)  ftsH ← protease, ATP‑dependent zinc‑metallo
RA 3,326,134 A→C 6.2% S219S (TCT→TCG)  ftsH ← protease, ATP‑dependent zinc‑metallo
JC 3,342,930 Δ3 bp 3.6% coding (240‑242/576 nt) yrbK → hypothetical protein
RA 3,397,813 C→G 100% D141H (GAT→CAT)  yhdE ← hypothetical protein
RA 3,441,343 A→G 8.1% E254E (GAA→GAG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,347 C→A 9.1% L256M (CTG→ATG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,352 A→G 10.9% V257V (GTA→GTG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,356 T→G 11.1% S259A (TCC→GCC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,358 C→G 11.3% S259S (TCC→TCG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,364 C→T 11.6% R261R (CGC→CGT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,370 A→C 14.8% G263G (GGA→GGC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,376 T→C 14.4% D265D (GAT→GAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,379 G→C 14.6% T266T (ACG→ACC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,380 G→A 14.6% V267M (GTG→ATG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,382 G→C 14.7% V267V (GTG→GTC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,388 T→C 19.8% D269D (GAT→GAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,391 C→G 19.9% L270L (CTC→CTG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,401 C→A 18.9% R274S (CGC→AGC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,402 G→A 19.0% R274H (CGC→CAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,403 C→G 18.9% R274R (CGC→CGG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,404 T→G 18.9% Y275D (TAT→GAT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,406 T→C 19.0% Y275Y (TAT→TAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,431 T→C 14.6% L284L (TTG→CTG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,952 G→T 5.4% A457A (GCG→GCT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,958 T→C 5.1% F459F (TTT→TTC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,967 G→C 5.2% L462L (CTG→CTC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,970 G→C 5.2% G463G (GGG→GGC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,976 A→G 5.2% L465L (CTA→CTG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,977 A→G 5.3% T466A (ACT→GCT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,979 T→A 5.3% T466T (ACT→ACA)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,985 T→C 8.3% D468D (GAT→GAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,441,988 T→C 8.1% I469I (ATT→ATC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,007 T→A 11.2% F476I (TTC→ATC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,017 G→C 11.7% G479A (GGG→GCG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,018 G→T 11.7% G479G (GGG→GGT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,021 T→C 11.4% I480I (ATT→ATC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,024 T→C 11.3% G481G (GGT→GGC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,030 G→A 12.0% A483A (GCG→GCA)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,033 G→C 11.5% M484I (ATG→ATC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,037 +C 6.5% coding (1456/1896 nt) thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,040 T→A 6.1% W487R (TGG→AGG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,044 T→C 6.1% F488S (TTT→TCT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,048 C→T 6.0% G489G (GGC→GGT)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,049 T→A 6.2% C490S (TGC→AGC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,050 G→C 6.7% C490S (TGC→TCC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,054 G→C 6.6% A491A (GCG→GCC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,063 T→C 6.3% C494C (TGT→TGC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,069 A→C 6.6% V496V (GTA→GTC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,075 A→G 4.6% P498P (CCA→CCG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,078 A→G 3.5% K499K (AAA→AAG)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,084 T→C 2.1% H501H (CAT→CAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,442,192 T→C 4.3% D537D (GAT→GAC)  thiC → thiamin (pyrimidine moiety) biosynthesis protein
RA 3,449,979 C→T 5.7% P451P (CCG→CCA)  rpoC ← RNA polymerase, beta prime subunit
RA 3,449,991 G→A 12.9% I447I (ATC→ATT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,449,994 A→T 12.9% A446A (GCT→GCA)  rpoC ← RNA polymerase, beta prime subunit
RA 3,449,997 T→C 13.5% K445K (AAA→AAG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,003 T→C 13.0% E443E (GAA→GAG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,006 G→A 12.9% I442I (ATC→ATT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,008 T→C 13.0% I442V (ATC→GTC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,012 T→G 12.7% V440V (GTA→GTC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,018 T→C 13.0% E438E (GAA→GAG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,021 A→G 12.6% F437F (TTT→TTC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,024 T→C 12.5% A436A (GCA→GCG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,030 G→A 12.3% I434I (ATC→ATT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,039 A→G 11.6% R431R (CGT→CGC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,048 A→C 11.5% T428T (ACT→ACG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,051 C→A 11.6% P427P (CCG→CCT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,069 T→G 9.3% V421V (GTA→GTC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,079 T→C 4.4% E418G (GAA→GGA)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,210 C→A 4.5% L374L (CTG→CTT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,213 T→A 4.4% A373A (GCA→GCT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,219 T→C 4.6% K371K (AAA→AAG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,220 T→A 4.9% K371I (AAA→ATA)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,221 T→G 4.8% K371Q (AAA→CAA)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,234 G→A 15.7% C366C (TGC→TGT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,240 A→G 15.3% H364H (CAT→CAC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,246 A→C 14.9% R362R (CGT→CGG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,247 C→T 15.1% R362H (CGT→CAT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,248 G→T 15.1% R362S (CGT→AGT)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,252 G→C 14.8% Y360* (TAC→TAG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,254 A→G 15.2% Y360H (TAC→CAC)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,255 T→C 15.8% P359P (CCA→CCG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,273 A→C 17.6% S353S (TCT→TCG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,450,303 G→C 14.4% L343L (CTC→CTG)  rpoC ← RNA polymerase, beta prime subunit
RA 3,451,558 A→G 6.0% V1293V (GTT→GTC)  rpoB ← RNA polymerase subunit beta
RA 3,451,560 C→T 6.1% V1293I (GTT→ATT)  rpoB ← RNA polymerase subunit beta
RA 3,451,569 T→G 9.9% M1290L (ATG→CTG)  rpoB ← RNA polymerase subunit beta
RA 3,451,570 T→C 10.0% E1289E (GAA→GAG)  rpoB ← RNA polymerase subunit beta
RA 3,451,585 T→G 19.7% A1284A (GCA→GCC)  rpoB ← RNA polymerase subunit beta
RA 3,451,588 T→A 19.7% A1283A (GCA→GCT)  rpoB ← RNA polymerase subunit beta
RA 3,451,600 T→C 23.7% E1279E (GAA→GAG)  rpoB ← RNA polymerase subunit beta
RA 3,451,602 C→G 23.0% E1279Q (GAA→CAA)  rpoB ← RNA polymerase subunit beta
RA 3,451,605 G→T 23.4% L1278M (CTG→ATG)  rpoB ← RNA polymerase subunit beta
RA 3,451,606 C→T 23.4% A1277A (GCG→GCA)  rpoB ← RNA polymerase subunit beta
RA 3,451,615 T→C 29.0% E1274E (GAA→GAG)  rpoB ← RNA polymerase subunit beta
RA 3,451,624 C→A 32.6% G1271G (GGG→GGT)  rpoB ← RNA polymerase subunit beta
RA 3,451,630 A→G 35.4% R1269R (CGT→CGC)  rpoB ← RNA polymerase subunit beta
RA 3,451,648 T→A 40.8% A1263A (GCA→GCT)  rpoB ← RNA polymerase subunit beta
RA 3,451,677 C→T 39.5% V1254I (GTT→ATT)  rpoB ← RNA polymerase subunit beta
RA 3,451,680 G→T 36.4% L1253M (CTG→ATG)  rpoB ← RNA polymerase subunit beta
RA 3,451,682 C→G 36.1% S1252T (AGC→ACC)  rpoB ← RNA polymerase subunit beta
RA 3,451,683 T→A 35.8% S1252C (AGC→TGC)  rpoB ← RNA polymerase subunit beta
RA 3,451,687 A→C 36.3% S1250S (TCT→TCG)  rpoB ← RNA polymerase subunit beta
RA 3,451,689 A→G 35.7% S1250P (TCT→CCT)  rpoB ← RNA polymerase subunit beta
RA 3,451,702 C→A 35.2% A1245A (GCG→GCT)  rpoB ← RNA polymerase subunit beta
RA 3,451,708 C→A 34.6% M1243I (ATG→ATT)  rpoB ← RNA polymerase subunit beta
RA 3,451,714 G→C 33.8% D1241E (GAC→GAG)  rpoB ← RNA polymerase subunit beta
RA 3,451,726 G→T 4.4% H1237Q (CAC→CAA)  rpoB ← RNA polymerase subunit beta
RA 3,451,731 T→G 26.6% N1236H (AAC→CAC)  rpoB ← RNA polymerase subunit beta
RA 3,451,735 T→C 24.6% K1234K (AAA→AAG)  rpoB ← RNA polymerase subunit beta
RA 3,451,753 A→G 14.6% G1228G (GGT→GGC)  rpoB ← RNA polymerase subunit beta
RA 3,451,756 A→C 13.1% V1227V (GTT→GTG)  rpoB ← RNA polymerase subunit beta
RA 3,451,795 A→G 4.6% D1214D (GAT→GAC)  rpoB ← RNA polymerase subunit beta
RA 3,453,444 C→T 5.9% A665T (GCG→ACG)  rpoB ← RNA polymerase subunit beta
RA 3,453,814 T→G 2.3% E541D (GAA→GAC)  rpoB ← RNA polymerase subunit beta
RA 3,453,829 G→A 6.8% G536G (GGC→GGT)  rpoB ← RNA polymerase subunit beta
RA 3,453,832 T→C 6.9% P535P (CCA→CCG)  rpoB ← RNA polymerase subunit beta
RA 3,453,835 G→A 7.0% G534G (GGC→GGT)  rpoB ← RNA polymerase subunit beta
RA 3,453,838 G→C 6.8% L533L (CTC→CTG)  rpoB ← RNA polymerase subunit beta
RA 3,453,847 G→C 6.8% I530M (ATC→ATG)  rpoB ← RNA polymerase subunit beta
RA 3,453,849 T→G 6.5% I530L (ATC→CTC)  rpoB ← RNA polymerase subunit beta
RA 3,453,856 T→C 6.5% K527K (AAA→AAG)  rpoB ← RNA polymerase subunit beta
RA 3,453,865 A→C 6.3% I524M (ATT→ATG)  rpoB ← RNA polymerase subunit beta
RA 3,453,867 T→G 6.1% I524L (ATT→CTT)  rpoB ← RNA polymerase subunit beta
RA 3,453,868 C→A 6.3% E523D (GAG→GAT)  rpoB ← RNA polymerase subunit beta
RA 3,453,871 A→C 6.1% S522S (TCT→TCG)  rpoB ← RNA polymerase subunit beta
RA 3,453,879 G→A 6.0% P520S (CCG→TCG)  rpoB ← RNA polymerase subunit beta
RA 3,453,895 A→G 5.5% F514F (TTT→TTC)  rpoB ← RNA polymerase subunit beta
RA 3,460,360 T→A 15.1% V126V (GTA→GTT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,366 A→G 11.6% R124R (CGT→CGC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,370 C→G 11.6% G123A (GGT→GCT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,375 C→G 7.6% L121L (CTG→CTC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,378 G→A 6.7% I120I (ATC→ATT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,380 T→C 5.9% I120V (ATC→GTC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,405 G→A 6.2% G111G (GGC→GGT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,411 A→G 7.0% T109T (ACT→ACC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,414 C→A 6.8% A108A (GCG→GCT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,417 A→G 6.2% A107A (GCT→GCC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,420 A→G 6.2% V106V (GTT→GTC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,423 T→A 4.4% V105V (GTA→GTT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,429 G→A 4.7% I103I (ATC→ATT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,447 C→A 4.1% A97A (GCG→GCT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,468 T→C 7.9% K90K (AAA→AAG)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,471 A→G 8.5% V89V (GTT→GTC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,473 C→T 8.5% V89I (GTT→ATT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,474 A→G 8.5% Y88Y (TAT→TAC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,492 G→A 7.9% C82C (TGC→TGT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,493 C→G 7.9% C82S (TGC→TCC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,494 A→C 8.2% C82G (TGC→GGC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,498 T→G 9.2% V80V (GTA→GTC)  tufB ← protein chain elongation factor EF‑Tu
RA 3,460,504 T→A 9.1% A78A (GCA→GCT)  tufB ← protein chain elongation factor EF‑Tu
RA 3,682,560 T→A 8.1% Q215L (CAG→CTG)  ilvD ← dihydroxyacid dehydratase
RA 3,682,571 C→G 8.6% L211L (CTG→CTC)  ilvD ← dihydroxyacid dehydratase
RA 3,682,577 T→C 8.8% E209E (GAA→GAG)  ilvD ← dihydroxyacid dehydratase
RA 3,682,595 T→C 8.7% S203S (TCA→TCG)  ilvD ← dihydroxyacid dehydratase
RA 3,682,601 A→T 8.5% A201A (GCT→GCA)  ilvD ← dihydroxyacid dehydratase
RA 3,682,607 A→G 8.5% F199F (TTT→TTC)  ilvD ← dihydroxyacid dehydratase
RA 3,682,613 C→A 9.0% G197G (GGG→GGT)  ilvD ← dihydroxyacid dehydratase
RA 3,682,616 G→C 9.0% S196S (TCC→TCG)  ilvD ← dihydroxyacid dehydratase
RA 3,682,622 G→A 9.3% S194S (TCC→TCT)  ilvD ← dihydroxyacid dehydratase
RA 3,682,628 G→A 8.8% C192C (TGC→TGT)  ilvD ← dihydroxyacid dehydratase
RA 3,682,637 A→G 8.6% C189C (TGT→TGC)  ilvD ← dihydroxyacid dehydratase
RA 3,682,643 G→C 6.8% S187S (TCC→TCG)  ilvD ← dihydroxyacid dehydratase
RA 3,682,646 A→G 5.2% R186R (CGT→CGC)  ilvD ← dihydroxyacid dehydratase
RA 3,682,649 T→C 3.5% E185E (GAA→GAG)  ilvD ← dihydroxyacid dehydratase
RA 3,717,810 T→C 6.2% I329I (ATT→ATC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,816 A→G 6.2% E331E (GAA→GAG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,820 C→A 6.0% Q333K (CAG→AAG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,825 G→A 6.1% A334A (GCG→GCA)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,826 G→A 6.1% G335S (GGT→AGT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,827 G→A 6.1% G335D (GGT→GAT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,828 T→C 5.9% G335G (GGT→GGC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,834 T→G 5.9% V337V (GTT→GTG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,837 T→G 5.9% S338S (TCT→TCG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,840 G→C 6.5% A339A (GCG→GCC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,844 G→A 6.5% V341I (GTT→ATT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,858 A→C 6.5% V345V (GTA→GTC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,873 T→C 7.8% D350D (GAT→GAC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,876 T→C 8.0% G351G (GGT→GGC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,880 A→G 11.3% I353V (ATC→GTC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,888 G→C 11.7% L355L (CTG→CTC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,891 A→G 7.7% E356E (GAA→GAG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,892 A→T 7.7% T357S (ACC→TCC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,895 A→G 7.7% N358D (AAC→GAC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,908 C→A 10.1% A362D (GCC→GAC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,909 C→G 10.3% A362A (GCC→GCG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,913 A→G 10.0% I364V (ATT→GTT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,915 T→C 10.2% I364I (ATT→ATC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,918 T→C 10.0% R365R (CGT→CGC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,921 T→G 10.4% P366P (CCT→CCG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,924 G→T 10.7% A367A (GCG→GCT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,925 G→A 10.4% V368I (GTT→ATT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,931 C→G 10.3% P370A (CCG→GCG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,932 C→T 10.3% P370L (CCG→CTG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,933 G→C 10.0% P370P (CCG→CCC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,937 A→G 10.2% I372V (ATT→GTT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,939 T→G 10.2% I372M (ATT→ATG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,942 C→G 10.1% S373S (TCC→TCG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,963 A→C 8.5% A380A (GCA→GCC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,976 A→G 4.1% I385V (ATC→GTC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,977 T→G 4.2% I385S (ATC→AGC)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
RA 3,717,988 C→G 3.3% L389V (CTG→GTG)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha
MC JC 3,742,936 Δ1,336 bp 100% insD–insC insD, insC
MC JC 3,746,911 Δ1,199 bp 100% insH insH
RA 3,750,122 Δ1 bp 100% coding (365/1416 nt) tnaA ← tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
MC JC 3,750,591 Δ1,199 bp 100% insH insH
RA 3,884,404 T→C 7.5% I167I (ATT→ATC)  aldB → aldehyde dehydrogenase B
RA 3,884,425 G→C 8.1% L174L (CTG→CTC)  aldB → aldehyde dehydrogenase B
RA 3,884,434 G→C 6.9% A177A (GCG→GCC)  aldB → aldehyde dehydrogenase B
RA 3,884,436 G→C 6.8% S178T (AGC→ACC)  aldB → aldehyde dehydrogenase B
RA 3,884,437 C→G 6.9% S178R (AGC→AGG)  aldB → aldehyde dehydrogenase B
RA 3,884,446 G→C 7.5% M181I (ATG→ATC)  aldB → aldehyde dehydrogenase B
RA 3,884,452 C→G 7.4% P183P (CCC→CCG)  aldB → aldehyde dehydrogenase B
RA 3,884,461 G→C 7.3% A186A (GCG→GCC)  aldB → aldehyde dehydrogenase B
RA 3,884,464 G→C 7.3% A187A (GCG→GCC)  aldB → aldehyde dehydrogenase B
RA 3,884,473 T→C 7.4% C190C (TGT→TGC)  aldB → aldehyde dehydrogenase B
RA 3,884,474 G→A 7.7% V191M (GTG→ATG)  aldB → aldehyde dehydrogenase B
RA 3,884,476 G→C 7.7% V191V (GTG→GTC)  aldB → aldehyde dehydrogenase B
RA 3,884,479 G→A 7.4% V192V (GTG→GTA)  aldB → aldehyde dehydrogenase B
RA 3,884,482 G→C 7.3% L193L (CTG→CTC)  aldB → aldehyde dehydrogenase B
RA 3,884,485 A→G 7.4% K194K (AAA→AAG)  aldB → aldehyde dehydrogenase B
RA 3,898,657 C→G 100% L259V (CTG→GTG)  yiaJ → DNA‑binding transcriptional repressor
MC JC 3,958,123 Δ34 bp 100% coding (1156‑1189/1287 nt) dctA → C4‑dicarboxylic acid, orotate and citrate transporter
RA 4,051,634 Δ1 bp 2.9% coding (400/1071 nt) ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,636 G→T 2.6% E134D (GAG→GAT)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,642 C→G 3.3% S136S (TCC→TCG)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,645 C→T 3.5% G137G (GGC→GGT)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,654 C→T 10.6% R140R (CGC→CGT)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,678 G→C 19.2% A148A (GCG→GCC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,681 T→C 19.0% I149I (ATT→ATC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,684 G→C 20.2% V150V (GTG→GTC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,688 G→C 19.1% D152H (GAT→CAT)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,689 A→G 18.5% D152G (GAT→GGT)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,690 T→A 18.5% D152E (GAT→GAA)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,694 G→A 20.9% A154T (GCG→ACG)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,695 C→A 20.5% A154E (GCG→GAG)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,699 G→C 19.4% V155V (GTG→GTC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,705 G→C 18.5% L157L (CTG→CTC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,706 T→A 18.7% F158I (TTT→ATT)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,708 T→G 19.8% F158L (TTT→TTG)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,711 T→C 19.1% D159D (GAT→GAC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,723 T→A 17.3% S163S (TCT→TCA)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,729 C→G 15.8% L165L (CTC→CTG)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,732 T→C 16.1% D166D (GAT→GAC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,741 G→C 12.8% L169L (CTG→CTC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,051,747 G→C 9.3% V171V (GTG→GTC)  ugpC → glycerol‑3‑phosphate transporter subunit
RA 4,090,749 A→T 100% Q135L (CAG→CTG)  malQ → 4‑alpha‑glucanotransferase
RA 4,153,863 G→A 19.3% A145V (GCA→GTA)  crp ← DNA‑binding transcriptional dual regulator
RA 4,165,991 A→C 100% K43T (AAA→ACA)  rpsL → 30S ribosomal protein S12
RA 4,166,073 A→G 5.7% E70E (GAA→GAG)  rpsL → 30S ribosomal protein S12
RA 4,166,076 T→C 5.7% G71G (GGT→GGC)  rpsL → 30S ribosomal protein S12
RA 4,166,098 G→A 10.2% V79M (GTG→ATG)  rpsL → 30S ribosomal protein S12
RA 4,166,101 A→G 11.3% I80V (ATC→GTC)  rpsL → 30S ribosomal protein S12
RA 4,166,103 C→G 11.3% I80M (ATC→ATG)  rpsL → 30S ribosomal protein S12
RA 4,166,106 G→C 10.9% L81L (CTG→CTC)  rpsL → 30S ribosomal protein S12
RA 4,166,107 A→G 11.3% I82V (ATC→GTC)  rpsL → 30S ribosomal protein S12
RA 4,166,109 C→T 11.2% I82I (ATC→ATT)  rpsL → 30S ribosomal protein S12
RA 4,166,112 T→C 10.3% R83R (CGT→CGC)  rpsL → 30S ribosomal protein S12
RA 4,166,115 C→T 10.7% G84G (GGC→GGT)  rpsL → 30S ribosomal protein S12
RA 4,166,127 A→G 12.0% K88K (AAA→AAG)  rpsL → 30S ribosomal protein S12
RA 4,166,142 T→C 12.2% V93V (GTT→GTC)  rpsL → 30S ribosomal protein S12
RA 4,166,145 T→C 12.2% R94R (CGT→CGC)  rpsL → 30S ribosomal protein S12
RA 4,166,149 C→A 12.4% H96N (CAC→AAC)  rpsL → 30S ribosomal protein S12
RA 4,166,151 C→G 12.5% H96Q (CAC→CAG)  rpsL → 30S ribosomal protein S12
RA 4,166,153 C→T 12.9% T97I (ACC→ATC)  rpsL → 30S ribosomal protein S12
RA 4,166,157 A→C 11.4% V98V (GTA→GTC)  rpsL → 30S ribosomal protein S12
RA 4,166,164 G→T 6.8% A101S (GCG→TCG)  rpsL → 30S ribosomal protein S12
RA 4,166,169 T→C 6.0% L102L (CTT→CTC)  rpsL → 30S ribosomal protein S12
RA 4,166,173 T→A 1.5% C104S (TGC→AGC)  rpsL → 30S ribosomal protein S12
RA 4,166,174 G→C 1.5% C104S (TGC→TCC)  rpsL → 30S ribosomal protein S12
RA 4,166,177 C→A 1.4% S105Y (TCC→TAC)  rpsL → 30S ribosomal protein S12
RA 4,166,178 C→G 1.4% S105S (TCC→TCG)  rpsL → 30S ribosomal protein S12
RA 4,166,184 T→C 1.4% V107V (GTT→GTC)  rpsL → 30S ribosomal protein S12
RA 4,166,187 A→G 1.4% K108K (AAA→AAG)  rpsL → 30S ribosomal protein S12
RA 4,166,193 T→C 1.4% R110R (CGT→CGC)  rpsL → 30S ribosomal protein S12
RA 4,168,097 A→C 4.1% D399A (GAC→GCC)  fusA → protein chain elongation factor EF‑G
RA 4,168,098 C→A 4.2% D399E (GAC→GAA)  fusA → protein chain elongation factor EF‑G
RA 4,168,100 C→A 4.2% P400Q (CCG→CAG)  fusA → protein chain elongation factor EF‑G
RA 4,168,107 G→T 4.4% A402A (GCG→GCT)  fusA → protein chain elongation factor EF‑G
RA 4,168,110 G→A 4.3% P403P (CCG→CCA)  fusA → protein chain elongation factor EF‑G
RA 4,168,114 A→G 4.2% I405V (ATT→GTT)  fusA → protein chain elongation factor EF‑G
RA 4,168,122 A→G 4.3% E407E (GAA→GAG)  fusA → protein chain elongation factor EF‑G
RA 4,168,123 C→T 4.3% R408C (CGT→TGT)  fusA → protein chain elongation factor EF‑G
RA 4,168,124 G→C 4.2% R408P (CGT→CCT)  fusA → protein chain elongation factor EF‑G
RA 4,168,125 T→C 4.2% R408R (CGT→CGC)  fusA → protein chain elongation factor EF‑G
RA 4,168,129 G→T 4.3% E410* (GAA→TAA)  fusA → protein chain elongation factor EF‑G
RA 4,168,130 A→C 4.3% E410A (GAA→GCA)  fusA → protein chain elongation factor EF‑G
RA 4,168,131 A→C 4.3% E410D (GAA→GAC)  fusA → protein chain elongation factor EF‑G
RA 4,168,137 T→G 4.6% P412P (CCT→CCG)  fusA → protein chain elongation factor EF‑G
RA 4,168,140 G→T 4.4% E413D (GAG→GAT)  fusA → protein chain elongation factor EF‑G
RA 4,168,146 A→T 4.6% V415V (GTA→GTT)  fusA → protein chain elongation factor EF‑G
RA 4,168,290 A→G 12.7% E463E (GAA→GAG)  fusA → protein chain elongation factor EF‑G
RA 4,168,293 G→C 12.6% L464L (CTG→CTC)  fusA → protein chain elongation factor EF‑G
RA 4,168,303 A→G 18.1% I468V (ATC→GTC)  fusA → protein chain elongation factor EF‑G
RA 4,168,306 A→C 17.9% I469L (ATC→CTC)  fusA → protein chain elongation factor EF‑G
RA 4,168,308 C→G 17.9% I469M (ATC→ATG)  fusA → protein chain elongation factor EF‑G
RA 4,168,317 T→C 17.1% R472R (CGT→CGC)  fusA → protein chain elongation factor EF‑G
RA 4,168,329 A→G 16.4% E476E (GAA→GAG)  fusA → protein chain elongation factor EF‑G
RA 4,168,335 C→G 16.1% N478K (AAC→AAG)  fusA → protein chain elongation factor EF‑G
RA 4,168,338 T→C 16.5% V479V (GTT→GTC)  fusA → protein chain elongation factor EF‑G
RA 4,168,344 G→A 17.0% A481A (GCG→GCA)  fusA → protein chain elongation factor EF‑G
RA 4,168,348 G→A 17.0% V483I (GTA→ATA)  fusA → protein chain elongation factor EF‑G
RA 4,168,350 A→C 16.9% V483V (GTA→GTC)  fusA → protein chain elongation factor EF‑G
RA 4,168,374 T→C 14.1% R491R (CGT→CGC)  fusA → protein chain elongation factor EF‑G
RA 4,168,377 A→G 12.1% E492E (GAA→GAG)  fusA → protein chain elongation factor EF‑G
RA 4,168,380 T→C 10.3% T493T (ACT→ACC)  fusA → protein chain elongation factor EF‑G
RA 4,168,387 C→A 3.7% Q496K (CAG→AAG)  fusA → protein chain elongation factor EF‑G
RA 4,169,293 A→G 12.7% E69E (GAA→GAG)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,297 G→C 13.0% D71H (GAC→CAC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,299 C→G 13.3% D71E (GAC→GAG)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,303 C→G 13.5% P73A (CCG→GCG)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,304 C→A 13.4% P73Q (CCG→CAG)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,307 C→A 13.2% T74N (ACC→AAC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,308 C→G 13.2% T74T (ACC→ACG)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,320 A→T 25.6% A78A (GCA→GCT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,326 A→C 24.0% V80V (GTA→GTC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,330 T→G 19.3% C82G (TGC→GGC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,331 G→C 17.7% C82S (TGC→TCC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,332 C→T 17.0% C82C (TGC→TGT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,338 G→C 28.7% G84G (GGG→GGC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,350 T→C 30.4% Y88Y (TAT→TAC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,351 G→A 29.7% V89I (GTT→ATT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,353 T→C 29.1% V89V (GTT→GTC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,356 A→G 28.2% K90K (AAA→AAG)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,395 C→T 33.8% I103I (ATC→ATT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,401 A→T 35.0% V105V (GTA→GTT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,404 T→C 34.7% V106V (GTT→GTC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,407 T→C 35.0% A107A (GCT→GCC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,410 G→T 34.6% A108A (GCG→GCT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,413 T→C 34.5% T109T (ACT→ACC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,419 C→T 35.9% G111G (GGC→GGT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,444 A→G 32.1% I120V (ATC→GTC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,446 C→T 33.3% I120I (ATC→ATT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,449 G→C 40.8% L121L (CTG→CTC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,454 G→C 39.8% G123A (GGT→GCT)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,458 T→C 38.8% R124R (CGT→CGC)  tufA → protein chain elongation factor EF‑Tu
RA 4,169,464 A→T 46.4% V126V (GTA→GTT)  tufA → protein chain elongation factor EF‑Tu
MC JC 4,310,363 Δ1,199 bp 100% insH–[alsK] insH, [alsK]
RA 4,347,339 C→T 12.7% R251C (CGC→TGC)  melA → alpha‑galactosidase
RA 4,371,271 Δ2 bp 100% intergenic (‑6/+299) dcuA ← / ← aspA C4‑dicarboxylate antiporter/aspartate ammonia‑lyase
RA 4,546,535 T→A 100% intergenic (+296/‑182) fimB → / → fimE tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA
RA 4,633,691 G→C 6.3% L504L (CTC→CTG)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,715 A→G 10.2% V496V (GTT→GTC)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,720 T→C 10.1% M495V (ATG→GTG)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,721 C→G 10.3% A494A (GCG→GCC)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,736 C→G 10.9% E489D (GAG→GAC)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,738 C→T 11.3% E489K (GAG→AAG)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,745 G→T 11.3% A486A (GCC→GCA)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,759 C→A 11.5% A482S (GCG→TCG)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,760 G→A 11.5% R481R (CGC→CGT)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,762 G→A 11.5% R481C (CGC→TGC)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,774 T→C 10.7% I477V (ATC→GTC)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,775 A→G 10.7% D476D (GAT→GAC)  yjjK ← ABC transporter ATP‑binding protein
RA 4,633,778 C→A 10.4% L475L (CTG→CTT)  yjjK ← ABC transporter ATP‑binding protein

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 1288312 1288518 207 169 [166] [166] 167 ychS hypothetical protein
* * ÷ NC_007779 2176983 2178208 1226 260 [0] [0] 278 insH insH
* * ÷ NC_007779 3128826–3130002 3147473 17472–18648 168 [165] [1] 192 [yghO]–[yghZ] 19 genes
[yghO], insH, yghQ, yghR, yghS, yghT, pitB, gss, yghU, hybG, hybF, hybE, hybD, hybC, hybB, hybA, hybO, yghW, [yghZ]
* * ÷ NC_007779 3261134–3262332 3262337 6–1204 240 [0] [0] 336 insH–[tdcD] insH, [tdcD]

Unassigned new junction evidence...
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 273179 =NA (NA)89 (0.420) 65/180 NT 40.1% coding (1109/1146 nt) ykfC hypothetical protein
?NC_007779 657877 = 133 (0.630)coding (164/210 nt) cspE DNA‑binding transcriptional repressor
* ? NC_007779 = 274373NA (NA)77 (0.360) 60/180 NT 37.0% intergenic (‑32/‑176) insH/mmuP IS5 transposase and trans‑activator/S‑methylmethionine transporter
?NC_007779 = 657880 131 (0.620)coding (167/210 nt) cspE DNA‑binding transcriptional repressor
* ? NC_007779 289856 =NA (NA)165 (1.220) 89/114 NT 100% intergenic (‑327/+17) argF/insB ornithine carbamoyltransferase 2, chain F/IS1 transposase InsAB'
?NC_007779 = 2176982 0 (0.000)intergenic (‑281/‑69) gatB/insH PTS system galactitol‑specific transporter subunit IIB/IS5 element protein
* ? NC_007779 380484 =NA (NA)208 (0.980) 116/180 NT NA intergenic (‑418/‑46) yaiO/insC hypothetical protein/IS2 insertion element repressor InsA
?NC_007779 = 381407 NA (NA)coding (510/906 nt) insD IS2 insertion element transposase InsAB'
* ? NC_007779 380484 =NA (NA)26 (0.120) 25/180 NT 11.7% intergenic (‑418/‑46) yaiO/insC hypothetical protein/IS2 insertion element repressor InsA
?NC_007779 431208 = 196 (0.920)coding (30/885 nt) tsx nucleoside channel, receptor of phage T6 and colicin K
* ? NC_007779 381401 =NA (NA)224 (1.080) 122/176 NT NA coding (504/906 nt) insD IS2 insertion element transposase InsAB'
?NC_007779 = 381812 NA (NA)coding (303/387 nt) yaiF hypothetical protein
* ? NC_007779 = 381814NA (NA)10 (0.050) 9/180 NT 4.9% coding (301/387 nt) yaiF hypothetical protein
?NC_007779 = 431212 193 (0.910)coding (26/885 nt) tsx nucleoside channel, receptor of phage T6 and colicin K
* ? NC_007779 = 608570NA (NA)203 (0.990) 107/174 NT 88.2% intergenic (+170/+112) insL/entD IS186/IS421 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex
?NC_007779 1305025 = 28 (0.130)coding (413/921 nt) oppB oligopeptide transporter subunit
* ? NC_007779 1209367 =133 (0.630)57 (0.330) 46/148 NT 31.6% coding (290/630 nt) ycfK hypothetical protein
?NC_007779 1211196 = 137 (0.780)intergenic (‑500/‑66) tfaE/pin tail fiber assembly protein/site‑specific DNA recombinase
* ? NC_007779 = 1209382137 (0.640)67 (0.380) 51/148 NT 34.9% coding (305/630 nt) ycfK hypothetical protein
?NC_007779 = 1211179 137 (0.780)intergenic (‑483/‑83) tfaE/pin tail fiber assembly protein/site‑specific DNA recombinase
* ? NC_007779 1221489 =4 (0.020)191 (0.920) 106/176 NT 98.0% intergenic (+711/+2393) ymgF/ymgD hypothetical protein/hypothetical protein
?NC_007779 1301041 = NA (NA)intergenic (+219/‑89) ychE/insC inner membrane protein/IS2 element protein
* ? NC_007779 = 12214951 (0.000)194 (0.910) 117/180 NT 99.5% intergenic (+717/+2387) ymgF/ymgD hypothetical protein/hypothetical protein
?NC_007779 = 1302369 NA (NA)intergenic (+11/‑527) insD/oppA IS2 element protein/oligopeptide transporter subunit
* ? NC_007779 = 130503727 (0.130)195 (0.960) 120/172 NT 88.3% coding (425/921 nt) oppB oligopeptide transporter subunit
?NC_007779 2519723 = NA (NA)intergenic (+33/‑54) nupC/insL nucleoside (except guanosine) transporter/transposase
* ? NC_007779 1397758 =NA (NA)195 (0.920) 115/180 NT 100% intergenic (‑122/‑32) ynaI/insH inner membrane protein/IS5 transposase and trans‑activator
?NC_007779 1672777 = 0 (0.000)intergenic (+111/‑313) ynfM/asr transporter/acid shock‑inducible periplasmic protein
* ? NC_007779 = 16727800 (0.000)203 (0.950) 111/180 NT 100% intergenic (+114/‑310) ynfM/asr transporter/acid shock‑inducible periplasmic protein
?NC_007779 1980209 = NA (NA)intergenic (‑289/+146) flhD/insH DNA‑binding transcriptional dual regulator/IS5 element protein
* ? NC_007779 1907280 =2 (0.010)105 (0.490) 74/180 NT 98.1% intergenic (+307/‑122) yobD/yebN inner membrane protein/inner membrane protein
?NC_007779 = 2412225 NA (NA)intergenic (‑55/‑782) insA/yfbQ IS1 element protein/aminotransferase
* ? NC_007779 = 19072885 (0.020)193 (0.910) 119/180 NT 97.5% intergenic (+315/‑114) yobD/yebN inner membrane protein/inner membrane protein
?NC_007779 2411458 = NA (NA)intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
* ? NC_007779 1910343 =106 (0.500)100 (0.480) 76/178 NT 48.8% coding (138/144 nt) yobG hypothetical protein
?NC_007779 = 2412224 NA (NA)intergenic (‑54/‑783) insA/yfbQ IS1 element protein/aminotransferase
* ? NC_007779 1980091 =1 (0.000)144 (0.680) 83/180 NT 99.3% intergenic (‑171/+264) flhD/insH DNA‑binding transcriptional dual regulator/IS5 element protein
?NC_007779 1980209 = NA (NA)intergenic (‑289/+146) flhD/insH DNA‑binding transcriptional dual regulator/IS5 element protein
* ? NC_007779 = 19800951 (0.000)234 (1.110) 131/178 NT 99.6% intergenic (‑175/+260) flhD/insH DNA‑binding transcriptional dual regulator/IS5 element protein
?NC_007779 2176984 = NA (NA)intergenic (‑283/‑67) gatB/insH PTS system galactitol‑specific transporter subunit IIB/IS5 element protein
* ? NC_007779 2071081 =NA (NA)4 (0.020) 4/174 NT 1.9% intergenic (‑1623/+8) insH/insD IS5 transposase and trans‑activator/IS2 insertion element transposase InsAB'
?NC_007779 = 2072412 216 (1.020)coding (32/261 nt) yoeE disrupted hemin or colicin receptor
* ? NC_007779 2178209 =0 (0.000)220 (1.030) 126/180 NT 100% intergenic (+178/+184) insH/gatZ IS5 element protein/D‑tagatose 1,6‑bisphosphate aldolase 2, subunit
?NC_007779 = 2412225 NA (NA)intergenic (‑55/‑782) insA/yfbQ IS1 element protein/aminotransferase
* ? NC_007779 2320794 =NA (NA)201 (0.940) 114/180 NT 100% intergenic (+633/+11) rcsB/insD DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN/IS2 element protein
?NC_007779 = 2589834 0 (0.000)intergenic (+470/‑69) acrD/yffB aminoglycoside/multidrug efflux system/hypothetical protein
* ? NC_007779 = 2322124NA (NA)226 (1.060) 130/180 NT 100% intergenic (‑91/‑2589) insC/atoS IS2 element protein/sensory histidine kinase in two‑component regulatory system with AtoC
?NC_007779 2589830 = 0 (0.000)intergenic (+466/‑73) acrD/yffB aminoglycoside/multidrug efflux system/hypothetical protein
* ? NC_007779 2411458 =NA (NA)228 (1.070) 126/180 NT 94.6% intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
?NC_007779 = 2985055 13 (0.060)coding (553/1230 nt) yqeG transporter
* ? NC_007779 = 2412224NA (NA)6 (0.030) 6/178 NT 2.8% intergenic (‑54/‑783) insA/yfbQ IS1 element protein/aminotransferase
?NC_007779 2430007 = 208 (0.980)coding (673/717 nt) hisM histidine/lysine/arginine/ornithine transporter subunit
* ? NC_007779 = 2412225NA (NA)15 (0.070) 13/180 NT 7.4% intergenic (‑55/‑782) insA/yfbQ IS1 element protein/aminotransferase
?NC_007779 2426145 = 189 (0.890)coding (79/648 nt) yfcG glutathione S‑transferase
* ? NC_007779 = 2412225NA (NA)189 (0.890) 110/180 NT 94.5% intergenic (‑55/‑782) insA/yfbQ IS1 element protein/aminotransferase
?NC_007779 2985047 = 11 (0.050)coding (545/1230 nt) yqeG transporter
* ? NC_007779 2519722 =NA (NA)10 (0.050) 9/176 NT 6.4% intergenic (+32/‑55) nupC/insL nucleoside (except guanosine) transporter/transposase
?NC_007779 = 3175166 149 (0.700)coding (324/828 nt) cpdA cyclic 3',5'‑adenosine monophosphate phosphodiesterase
* ? NC_007779 2519723 =NA (NA)46 (0.230) 40/172 NT 24.9% intergenic (+33/‑54) nupC/insL nucleoside (except guanosine) transporter/transposase
?NC_007779 3175156 = 145 (0.680)coding (334/828 nt) cpdA cyclic 3',5'‑adenosine monophosphate phosphodiesterase
* ? NC_007779 = 2521057NA (NA)43 (0.210) 32/174 NT 22.0% intergenic (+168/+32) insL/yfeA transposase/diguanylate cyclase
?NC_007779 = 3175170 158 (0.740)coding (320/828 nt) cpdA cyclic 3',5'‑adenosine monophosphate phosphodiesterase
* ? NC_007779 = 2521059NA (NA)10 (0.050) 10/172 NT 6.7% intergenic (+170/+30) insL/yfeA transposase/diguanylate cyclase
?NC_007779 3175156 = 145 (0.680)coding (334/828 nt) cpdA cyclic 3',5'‑adenosine monophosphate phosphodiesterase
* ? NC_007779 3147474 =1 (0.000)179 (0.840) 106/180 NT 99.4% coding (922/1041 nt) yghZ aldo‑keto reductase
?NC_007779 = 3262328 NA (NA)coding (1188/1296 nt) tdcD propionate kinase/acetate kinase C, anaerobic
* ? NC_007779 = 3186081NA (NA)127 (0.600) 81/178 NT 64.4% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 71 (0.330)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator
* ? NC_007779 = 32611330 (0.000)210 (1.060) 121/168 NT 100% intergenic (‑59/‑69) tdcE/insH pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein
?NC_007779 = 3748109 NA (NA)intergenic (+150/+962) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
* ? NC_007779 3261134 =NA (NA)175 (0.820) 103/180 NT 100% intergenic (‑60/‑68) tdcE/insH pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein
?NC_007779 3265774 = 0 (0.000)coding (110/990 nt) tdcB catabolic threonine dehydratase, PLP‑dependent
* ? NC_007779 3261135 =NA (NA)229 (1.090) 129/178 NT 100% intergenic (‑61/‑67) tdcE/insH pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein
?NC_007779 3262338 = 0 (0.000)coding (1178/1296 nt) tdcD propionate kinase/acetate kinase C, anaerobic
* ? NC_007779 = 32657770 (0.000)247 (1.160) 128/180 NT 100% coding (107/990 nt) tdcB catabolic threonine dehydratase, PLP‑dependent
?NC_007779 3365411 = NA (NA)intergenic (+368/+146) yhcD/insH outer membrane protein/IS5 transposase and trans‑activator
* ? NC_007779 = 351275973 (0.340)161 (0.770) 97/178 NT 69.0% coding (535/1026 nt) cytR DNA‑binding transcriptional dual regulator
?NC_007779 = 3744262 NA (NA)intergenic (‑90/+31) insC/yidZ IS2 element protein/DNA‑binding transcriptional regulator
* ? NC_007779 = 3744263NA (NA)247 (1.160) 134/180 NT 99.6% intergenic (‑91/+30) insC/yidZ IS2 element protein/DNA‑binding transcriptional regulator
?NC_007779 3903274 = 1 (0.000)coding (37/825 nt) bax hypothetical protein
* ? NC_007779 3746911 =NA (NA)240 (1.130) 114/180 NT 99.6% intergenic (‑509/‑68) mdtL/insH multidrug efflux system protein/IS5 element protein
?NC_007779 = 3748646 1 (0.000)intergenic (+687/+425) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
* ? NC_007779 = 3748105NA (NA)223 (1.050) 130/180 NT 100% intergenic (+146/+966) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
?NC_007779 3748643 = 0 (0.000)intergenic (+684/+428) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
* ? NC_007779 = 39032792 (0.010)192 (0.910) 109/178 NT 99.0% coding (42/825 nt) bax hypothetical protein
?NC_007779 = 4504190 NA (NA)intergenic (+10/‑89) insD/yjgW IS2 insertion element transposase InsAB'/hypothetical protein
* ? NC_007779 3987186 =NA (NA)200 (0.950) 113/178 NT 100% intergenic (‑732/‑31) slp/insH outer membrane lipoprotein/IS5 transposase and trans‑activator
?NC_007779 = 4009203 0 (0.000)coding (1379/1623 nt) yhiJ hypothetical protein
* ? NC_007779 = 3988379NA (NA)230 (1.080) 135/180 NT 100% coding (746/783 nt) yhiS hypothetical protein
?NC_007779 4009199 = 0 (0.000)coding (1375/1623 nt) yhiJ hypothetical protein
* ? NC_007779 4310363 =NA (NA)207 (0.970) 115/180 NT 100% intergenic (‑287/‑68) yjcS/insH alkyl sulfatase/IS5 element protein
?NC_007779 4353540 = 0 (0.000)intergenic (‑118/+453) dcuB/dcuR C4‑dicarboxylate antiporter/DNA‑binding response regulator in two‑component regulatory system with DcuS
* ? NC_007779 = 4311557NA (NA)197 (0.930) 121/180 NT 100% coding (921/1029 nt) alsK D‑allose kinase
?NC_007779 = 4353543 0 (0.000)intergenic (‑121/+450) dcuB/dcuR C4‑dicarboxylate antiporter/DNA‑binding response regulator in two‑component regulatory system with DcuS
* ? NC_007779 4355060 =0 (0.000)242 (1.140) 137/180 NT 100% coding (1281/1632 nt) dcuS sensory histidine kinase in two‑component regulatory system with DcuR, regulator of anaerobic fumarate respiration
?NC_007779 4502861 = NA (NA)intergenic (+241/‑46) intB/insC integrase/IS2 insertion element repressor InsA
* ? NC_007779 = 43550662 (0.010)203 (0.980) 118/176 NT 99.0% coding (1275/1632 nt) dcuS sensory histidine kinase in two‑component regulatory system with DcuR, regulator of anaerobic fumarate respiration
?NC_007779 = 4504189 NA (NA)intergenic (+9/‑90) insD/yjgW IS2 insertion element transposase InsAB'/hypothetical protein